Protein–RNA interactions for Protein: Q9BRF8

CPPED1, Serine/threonine-protein phosphatase CPPED1, humanhuman

Predicted RBP Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPPED1Q9BRF8 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CPPED1Q9BRF8 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CPPED1Q9BRF8 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.49■□□□□ 0.55
CPPED1Q9BRF8 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.49■□□□□ 0.55
CPPED1Q9BRF8 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.49■□□□□ 0.55
CPPED1Q9BRF8 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CPPED1Q9BRF8 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.49■□□□□ 0.55
CPPED1Q9BRF8 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CPPED1Q9BRF8 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.49■□□□□ 0.55
CPPED1Q9BRF8 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CPPED1Q9BRF8 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
CPPED1Q9BRF8 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CPPED1Q9BRF8 AC010980.2-201ENST00000587099 1412 ntBASIC18.49■□□□□ 0.55
CPPED1Q9BRF8 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPPED1Q9BRF8 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
CPPED1Q9BRF8 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPPED1Q9BRF8 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPPED1Q9BRF8 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.48■□□□□ 0.55
CPPED1Q9BRF8 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPPED1Q9BRF8 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.48■□□□□ 0.55
CPPED1Q9BRF8 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.48■□□□□ 0.55
CPPED1Q9BRF8 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CPPED1Q9BRF8 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.48■□□□□ 0.55
CPPED1Q9BRF8 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CPPED1Q9BRF8 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPPED1Q9BRF8 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPPED1Q9BRF8 AC006015.1-201ENST00000429970 570 ntBASIC18.48■□□□□ 0.55
CPPED1Q9BRF8 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CPPED1Q9BRF8 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.48■□□□□ 0.55
CPPED1Q9BRF8 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CPPED1Q9BRF8 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.48■□□□□ 0.55
CPPED1Q9BRF8 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.48■□□□□ 0.55
CPPED1Q9BRF8 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.48■□□□□ 0.55
CPPED1Q9BRF8 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.48■□□□□ 0.55
CPPED1Q9BRF8 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.48■□□□□ 0.55
CPPED1Q9BRF8 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CPPED1Q9BRF8 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPPED1Q9BRF8 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPPED1Q9BRF8 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CPPED1Q9BRF8 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CPPED1Q9BRF8 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.48■□□□□ 0.55
CPPED1Q9BRF8 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.47■□□□□ 0.55
CPPED1Q9BRF8 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CPPED1Q9BRF8 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
CPPED1Q9BRF8 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CPPED1Q9BRF8 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CPPED1Q9BRF8 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.47■□□□□ 0.55
CPPED1Q9BRF8 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
CPPED1Q9BRF8 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CPPED1Q9BRF8 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.47■□□□□ 0.55
CPPED1Q9BRF8 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.47■□□□□ 0.55
CPPED1Q9BRF8 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.47■□□□□ 0.55
CPPED1Q9BRF8 AC008694.1-202ENST00000636953 945 ntBASIC18.47■□□□□ 0.55
CPPED1Q9BRF8 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
CPPED1Q9BRF8 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CPPED1Q9BRF8 KRT17P1-201ENST00000399211 1546 ntBASIC18.47■□□□□ 0.55
CPPED1Q9BRF8 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CPPED1Q9BRF8 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
CPPED1Q9BRF8 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CPPED1Q9BRF8 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CPPED1Q9BRF8 AC018553.1-201ENST00000616682 1458 ntBASIC18.46■□□□□ 0.55
CPPED1Q9BRF8 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.46■□□□□ 0.55
CPPED1Q9BRF8 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CPPED1Q9BRF8 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
CPPED1Q9BRF8 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
CPPED1Q9BRF8 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CPPED1Q9BRF8 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CPPED1Q9BRF8 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CPPED1Q9BRF8 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CPPED1Q9BRF8 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CPPED1Q9BRF8 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CPPED1Q9BRF8 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CPPED1Q9BRF8 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.46■□□□□ 0.55
CPPED1Q9BRF8 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CPPED1Q9BRF8 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.46■□□□□ 0.55
CPPED1Q9BRF8 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.46■□□□□ 0.55
CPPED1Q9BRF8 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CPPED1Q9BRF8 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CPPED1Q9BRF8 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CPPED1Q9BRF8 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CPPED1Q9BRF8 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CPPED1Q9BRF8 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.46■□□□□ 0.55
CPPED1Q9BRF8 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CPPED1Q9BRF8 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CPPED1Q9BRF8 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CPPED1Q9BRF8 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.45■□□□□ 0.54
CPPED1Q9BRF8 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CPPED1Q9BRF8 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.45■□□□□ 0.54
CPPED1Q9BRF8 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CPPED1Q9BRF8 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.45■□□□□ 0.54
CPPED1Q9BRF8 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.45■□□□□ 0.54
CPPED1Q9BRF8 OR10C1-204ENST00000622521 1039 ntBASIC18.45■□□□□ 0.54
CPPED1Q9BRF8 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CPPED1Q9BRF8 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CPPED1Q9BRF8 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CPPED1Q9BRF8 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
CPPED1Q9BRF8 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.45■□□□□ 0.54
CPPED1Q9BRF8 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.45■□□□□ 0.54
CPPED1Q9BRF8 AC116351.2-201ENST00000606540 1585 ntBASIC18.45■□□□□ 0.54
CPPED1Q9BRF8 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms