Protein–RNA interactions for Protein: Q9BQY4

RHOXF2, Rhox homeobox family member 2, humanhuman

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOXF2Q9BQY4 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
RHOXF2Q9BQY4 MIR572-201ENST00000384983 95 ntBASIC20.68■□□□□ 0.9
RHOXF2Q9BQY4 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
RHOXF2Q9BQY4 FAM21FP-204ENST00000608637 956 ntBASIC20.68■□□□□ 0.9
RHOXF2Q9BQY4 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RHOXF2Q9BQY4 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.68■□□□□ 0.9
RHOXF2Q9BQY4 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RHOXF2Q9BQY4 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC20.68■□□□□ 0.9
RHOXF2Q9BQY4 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RHOXF2Q9BQY4 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RHOXF2Q9BQY4 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RHOXF2Q9BQY4 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.67■□□□□ 0.9
RHOXF2Q9BQY4 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RHOXF2Q9BQY4 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RHOXF2Q9BQY4 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.67■□□□□ 0.9
RHOXF2Q9BQY4 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RHOXF2Q9BQY4 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RHOXF2Q9BQY4 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.67■□□□□ 0.9
RHOXF2Q9BQY4 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RHOXF2Q9BQY4 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RHOXF2Q9BQY4 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.67■□□□□ 0.9
RHOXF2Q9BQY4 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RHOXF2Q9BQY4 AC007322.3-201ENST00000426526 701 ntBASIC20.67■□□□□ 0.9
RHOXF2Q9BQY4 SLC7A5P2-201ENST00000553010 536 ntBASIC20.67■□□□□ 0.9
RHOXF2Q9BQY4 TPRG1LP1-201ENST00000598702 760 ntBASIC20.67■□□□□ 0.9
RHOXF2Q9BQY4 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.67■□□□□ 0.9
RHOXF2Q9BQY4 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.67■□□□□ 0.9
RHOXF2Q9BQY4 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
RHOXF2Q9BQY4 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RHOXF2Q9BQY4 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC20.67■□□□□ 0.9
RHOXF2Q9BQY4 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.67■□□□□ 0.9
RHOXF2Q9BQY4 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.67■□□□□ 0.9
RHOXF2Q9BQY4 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RHOXF2Q9BQY4 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.67■□□□□ 0.9
RHOXF2Q9BQY4 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RHOXF2Q9BQY4 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RHOXF2Q9BQY4 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
RHOXF2Q9BQY4 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
RHOXF2Q9BQY4 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.66■□□□□ 0.9
RHOXF2Q9BQY4 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RHOXF2Q9BQY4 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RHOXF2Q9BQY4 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.66■□□□□ 0.9
RHOXF2Q9BQY4 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RHOXF2Q9BQY4 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RHOXF2Q9BQY4 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
RHOXF2Q9BQY4 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.66■□□□□ 0.9
RHOXF2Q9BQY4 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.66■□□□□ 0.9
RHOXF2Q9BQY4 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RHOXF2Q9BQY4 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.66■□□□□ 0.9
RHOXF2Q9BQY4 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RHOXF2Q9BQY4 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RHOXF2Q9BQY4 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC20.66■□□□□ 0.9
RHOXF2Q9BQY4 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.66■□□□□ 0.9
RHOXF2Q9BQY4 AL161938.1-201ENST00000569833 2180 ntBASIC20.66■□□□□ 0.9
RHOXF2Q9BQY4 AC135050.7-201ENST00000624508 2218 ntBASIC20.66■□□□□ 0.9
RHOXF2Q9BQY4 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
RHOXF2Q9BQY4 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RHOXF2Q9BQY4 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RHOXF2Q9BQY4 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RHOXF2Q9BQY4 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RHOXF2Q9BQY4 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RHOXF2Q9BQY4 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RHOXF2Q9BQY4 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RHOXF2Q9BQY4 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
RHOXF2Q9BQY4 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.65■□□□□ 0.9
RHOXF2Q9BQY4 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
RHOXF2Q9BQY4 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.65■□□□□ 0.9
RHOXF2Q9BQY4 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RHOXF2Q9BQY4 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RHOXF2Q9BQY4 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RHOXF2Q9BQY4 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RHOXF2Q9BQY4 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RHOXF2Q9BQY4 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RHOXF2Q9BQY4 AC091799.1-201ENST00000422823 811 ntBASIC20.65■□□□□ 0.9
RHOXF2Q9BQY4 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.65■□□□□ 0.9
RHOXF2Q9BQY4 AC079140.4-201ENST00000507448 529 ntBASIC20.65■□□□□ 0.9
RHOXF2Q9BQY4 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.65■□□□□ 0.9
RHOXF2Q9BQY4 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
RHOXF2Q9BQY4 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RHOXF2Q9BQY4 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RHOXF2Q9BQY4 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.65■□□□□ 0.9
RHOXF2Q9BQY4 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RHOXF2Q9BQY4 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.9
RHOXF2Q9BQY4 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
RHOXF2Q9BQY4 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.64■□□□□ 0.9
RHOXF2Q9BQY4 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RHOXF2Q9BQY4 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RHOXF2Q9BQY4 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RHOXF2Q9BQY4 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
RHOXF2Q9BQY4 AL356441.2-201ENST00000443009 864 ntBASIC20.64■□□□□ 0.89
RHOXF2Q9BQY4 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RHOXF2Q9BQY4 AL136162.1-201ENST00000607711 1078 ntBASIC20.64■□□□□ 0.89
RHOXF2Q9BQY4 AC006333.2-201ENST00000607957 2099 ntBASIC20.64■□□□□ 0.89
RHOXF2Q9BQY4 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RHOXF2Q9BQY4 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RHOXF2Q9BQY4 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RHOXF2Q9BQY4 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC20.64■□□□□ 0.89
RHOXF2Q9BQY4 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
RHOXF2Q9BQY4 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RHOXF2Q9BQY4 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms