Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.66■□□□□ 0.74
CPNE1Q99829 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPNE1Q99829 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPNE1Q99829 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CPNE1Q99829 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CPNE1Q99829 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPNE1Q99829 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.66■□□□□ 0.74
CPNE1Q99829 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.66■□□□□ 0.74
CPNE1Q99829 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPNE1Q99829 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.66■□□□□ 0.74
CPNE1Q99829 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPNE1Q99829 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CPNE1Q99829 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CPNE1Q99829 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.65■□□□□ 0.74
CPNE1Q99829 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CPNE1Q99829 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CPNE1Q99829 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.65■□□□□ 0.74
CPNE1Q99829 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.65■□□□□ 0.74
CPNE1Q99829 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CPNE1Q99829 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CPNE1Q99829 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CPNE1Q99829 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.65■□□□□ 0.74
CPNE1Q99829 GPX1P1-201ENST00000388829 606 ntBASIC19.65■□□□□ 0.74
CPNE1Q99829 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CPNE1Q99829 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CPNE1Q99829 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CPNE1Q99829 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CPNE1Q99829 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CPNE1Q99829 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CPNE1Q99829 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CPNE1Q99829 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
CPNE1Q99829 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CPNE1Q99829 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CPNE1Q99829 AC018553.1-201ENST00000616682 1458 ntBASIC19.65■□□□□ 0.74
CPNE1Q99829 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CPNE1Q99829 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.65■□□□□ 0.74
CPNE1Q99829 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
CPNE1Q99829 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CPNE1Q99829 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CPNE1Q99829 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CPNE1Q99829 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.64■□□□□ 0.74
CPNE1Q99829 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CPNE1Q99829 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CPNE1Q99829 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CPNE1Q99829 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CPNE1Q99829 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CPNE1Q99829 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CPNE1Q99829 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
CPNE1Q99829 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CPNE1Q99829 AC004911.1-201ENST00000416316 871 ntBASIC19.64■□□□□ 0.73
CPNE1Q99829 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.64■□□□□ 0.73
CPNE1Q99829 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CPNE1Q99829 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.64■□□□□ 0.73
CPNE1Q99829 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CPNE1Q99829 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.64■□□□□ 0.73
CPNE1Q99829 AC116351.2-201ENST00000606540 1585 ntBASIC19.64■□□□□ 0.73
CPNE1Q99829 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CPNE1Q99829 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.64■□□□□ 0.73
CPNE1Q99829 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CPNE1Q99829 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CPNE1Q99829 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.64■□□□□ 0.73
CPNE1Q99829 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CPNE1Q99829 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CPNE1Q99829 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
CPNE1Q99829 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.63■□□□□ 0.73
CPNE1Q99829 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.63■□□□□ 0.73
CPNE1Q99829 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CPNE1Q99829 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.63■□□□□ 0.73
CPNE1Q99829 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CPNE1Q99829 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CPNE1Q99829 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CPNE1Q99829 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CPNE1Q99829 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CPNE1Q99829 AC022517.1-201ENST00000592429 346 ntBASIC19.63■□□□□ 0.73
CPNE1Q99829 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CPNE1Q99829 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.63■□□□□ 0.73
CPNE1Q99829 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CPNE1Q99829 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CPNE1Q99829 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CPNE1Q99829 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CPNE1Q99829 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.62■□□□□ 0.73
CPNE1Q99829 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
CPNE1Q99829 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.62■□□□□ 0.73
CPNE1Q99829 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
CPNE1Q99829 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.62■□□□□ 0.73
CPNE1Q99829 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.62■□□□□ 0.73
CPNE1Q99829 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.62■□□□□ 0.73
CPNE1Q99829 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CPNE1Q99829 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CPNE1Q99829 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.62■□□□□ 0.73
CPNE1Q99829 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CPNE1Q99829 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.62■□□□□ 0.73
CPNE1Q99829 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.62■□□□□ 0.73
CPNE1Q99829 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CPNE1Q99829 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.62■□□□□ 0.73
CPNE1Q99829 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.62■□□□□ 0.73
CPNE1Q99829 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CPNE1Q99829 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.62■□□□□ 0.73
CPNE1Q99829 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.62■□□□□ 0.73
CPNE1Q99829 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms