Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.16■□□□□ 0.66
PKP4Q99569 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PKP4Q99569 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PKP4Q99569 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.16■□□□□ 0.66
PKP4Q99569 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.16■□□□□ 0.66
PKP4Q99569 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PKP4Q99569 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PKP4Q99569 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
PKP4Q99569 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PKP4Q99569 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PKP4Q99569 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.15■□□□□ 0.66
PKP4Q99569 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PKP4Q99569 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PKP4Q99569 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.15■□□□□ 0.66
PKP4Q99569 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
PKP4Q99569 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PKP4Q99569 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
PKP4Q99569 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PKP4Q99569 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PKP4Q99569 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PKP4Q99569 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.15■□□□□ 0.66
PKP4Q99569 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.15■□□□□ 0.66
PKP4Q99569 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PKP4Q99569 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.15■□□□□ 0.66
PKP4Q99569 KRT17P3-201ENST00000420566 1262 ntBASIC19.15■□□□□ 0.66
PKP4Q99569 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PKP4Q99569 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.15■□□□□ 0.66
PKP4Q99569 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.15■□□□□ 0.66
PKP4Q99569 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.15■□□□□ 0.66
PKP4Q99569 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.15■□□□□ 0.66
PKP4Q99569 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.15■□□□□ 0.66
PKP4Q99569 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
PKP4Q99569 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PKP4Q99569 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PKP4Q99569 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PKP4Q99569 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PKP4Q99569 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
PKP4Q99569 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PKP4Q99569 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.14■□□□□ 0.66
PKP4Q99569 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.14■□□□□ 0.66
PKP4Q99569 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.14■□□□□ 0.66
PKP4Q99569 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PKP4Q99569 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PKP4Q99569 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PKP4Q99569 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PKP4Q99569 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.14■□□□□ 0.65
PKP4Q99569 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PKP4Q99569 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
PKP4Q99569 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PKP4Q99569 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PKP4Q99569 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PKP4Q99569 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.14■□□□□ 0.65
PKP4Q99569 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.14■□□□□ 0.65
PKP4Q99569 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
PKP4Q99569 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.14■□□□□ 0.65
PKP4Q99569 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.14■□□□□ 0.65
PKP4Q99569 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PKP4Q99569 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PKP4Q99569 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PKP4Q99569 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PKP4Q99569 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.14■□□□□ 0.65
PKP4Q99569 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
PKP4Q99569 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PKP4Q99569 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
PKP4Q99569 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.13■□□□□ 0.65
PKP4Q99569 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.13■□□□□ 0.65
PKP4Q99569 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PKP4Q99569 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PKP4Q99569 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PKP4Q99569 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
PKP4Q99569 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PKP4Q99569 POU5F1P3-201ENST00000428824 1078 ntBASIC19.13■□□□□ 0.65
PKP4Q99569 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
PKP4Q99569 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.13■□□□□ 0.65
PKP4Q99569 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PKP4Q99569 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.13■□□□□ 0.65
PKP4Q99569 AC069544.1-201ENST00000609399 999 ntBASIC19.13■□□□□ 0.65
PKP4Q99569 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PKP4Q99569 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PKP4Q99569 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PKP4Q99569 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
PKP4Q99569 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
PKP4Q99569 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
PKP4Q99569 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PKP4Q99569 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
PKP4Q99569 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PKP4Q99569 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
PKP4Q99569 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PKP4Q99569 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.12■□□□□ 0.65
PKP4Q99569 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PKP4Q99569 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.12■□□□□ 0.65
PKP4Q99569 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PKP4Q99569 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
PKP4Q99569 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.12■□□□□ 0.65
PKP4Q99569 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PKP4Q99569 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.12■□□□□ 0.65
PKP4Q99569 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PKP4Q99569 AL158211.5-201ENST00000623583 2518 ntBASIC19.12■□□□□ 0.65
PKP4Q99569 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PKP4Q99569 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms