Protein–RNA interactions for Protein: Q96QV6

HIST1H2AA, Histone H2A type 1-A, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AAQ96QV6 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HIST1H2AAQ96QV6 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HIST1H2AAQ96QV6 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HIST1H2AAQ96QV6 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HIST1H2AAQ96QV6 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.04■□□□□ 0.32
HIST1H2AAQ96QV6 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
HIST1H2AAQ96QV6 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HIST1H2AAQ96QV6 METTL15-202ENST00000403099 795 ntTSL 5 BASIC17.04■□□□□ 0.32
HIST1H2AAQ96QV6 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.04■□□□□ 0.32
HIST1H2AAQ96QV6 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HIST1H2AAQ96QV6 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.04■□□□□ 0.32
HIST1H2AAQ96QV6 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.04■□□□□ 0.32
HIST1H2AAQ96QV6 RAP2CP1-201ENST00000605103 478 ntBASIC17.04■□□□□ 0.32
HIST1H2AAQ96QV6 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.04■□□□□ 0.32
HIST1H2AAQ96QV6 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HIST1H2AAQ96QV6 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
HIST1H2AAQ96QV6 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
HIST1H2AAQ96QV6 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.04■□□□□ 0.32
HIST1H2AAQ96QV6 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HIST1H2AAQ96QV6 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
HIST1H2AAQ96QV6 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HIST1H2AAQ96QV6 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HIST1H2AAQ96QV6 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HIST1H2AAQ96QV6 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HIST1H2AAQ96QV6 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.03■□□□□ 0.32
HIST1H2AAQ96QV6 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
HIST1H2AAQ96QV6 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.03■□□□□ 0.32
HIST1H2AAQ96QV6 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HIST1H2AAQ96QV6 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
HIST1H2AAQ96QV6 GPX1P1-201ENST00000388829 606 ntBASIC17.03■□□□□ 0.32
HIST1H2AAQ96QV6 MIPEPP3-201ENST00000412105 444 ntBASIC17.03■□□□□ 0.32
HIST1H2AAQ96QV6 PPP1R14BP3-201ENST00000509033 445 ntBASIC17.03■□□□□ 0.32
HIST1H2AAQ96QV6 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
HIST1H2AAQ96QV6 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.03■□□□□ 0.32
HIST1H2AAQ96QV6 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HIST1H2AAQ96QV6 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HIST1H2AAQ96QV6 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HIST1H2AAQ96QV6 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HIST1H2AAQ96QV6 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HIST1H2AAQ96QV6 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HIST1H2AAQ96QV6 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.03■□□□□ 0.32
HIST1H2AAQ96QV6 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HIST1H2AAQ96QV6 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
HIST1H2AAQ96QV6 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
HIST1H2AAQ96QV6 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
HIST1H2AAQ96QV6 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.02■□□□□ 0.32
HIST1H2AAQ96QV6 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.02■□□□□ 0.32
HIST1H2AAQ96QV6 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.02■□□□□ 0.32
HIST1H2AAQ96QV6 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HIST1H2AAQ96QV6 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.02■□□□□ 0.32
HIST1H2AAQ96QV6 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HIST1H2AAQ96QV6 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
HIST1H2AAQ96QV6 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.02■□□□□ 0.32
HIST1H2AAQ96QV6 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HIST1H2AAQ96QV6 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
HIST1H2AAQ96QV6 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
HIST1H2AAQ96QV6 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.02■□□□□ 0.32
HIST1H2AAQ96QV6 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.02■□□□□ 0.32
HIST1H2AAQ96QV6 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.02■□□□□ 0.32
HIST1H2AAQ96QV6 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.02■□□□□ 0.32
HIST1H2AAQ96QV6 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
HIST1H2AAQ96QV6 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
HIST1H2AAQ96QV6 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.02■□□□□ 0.32
HIST1H2AAQ96QV6 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.02■□□□□ 0.32
HIST1H2AAQ96QV6 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.02■□□□□ 0.32
HIST1H2AAQ96QV6 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HIST1H2AAQ96QV6 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
HIST1H2AAQ96QV6 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
HIST1H2AAQ96QV6 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
HIST1H2AAQ96QV6 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC17.02■□□□□ 0.31
HIST1H2AAQ96QV6 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
HIST1H2AAQ96QV6 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.02■□□□□ 0.31
HIST1H2AAQ96QV6 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HIST1H2AAQ96QV6 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
HIST1H2AAQ96QV6 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
HIST1H2AAQ96QV6 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
HIST1H2AAQ96QV6 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
HIST1H2AAQ96QV6 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
HIST1H2AAQ96QV6 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.01■□□□□ 0.31
HIST1H2AAQ96QV6 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.01■□□□□ 0.31
HIST1H2AAQ96QV6 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.01■□□□□ 0.31
HIST1H2AAQ96QV6 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
HIST1H2AAQ96QV6 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HIST1H2AAQ96QV6 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
HIST1H2AAQ96QV6 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.01■□□□□ 0.31
HIST1H2AAQ96QV6 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HIST1H2AAQ96QV6 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HIST1H2AAQ96QV6 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.01■□□□□ 0.31
HIST1H2AAQ96QV6 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.01■□□□□ 0.31
HIST1H2AAQ96QV6 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.01■□□□□ 0.31
HIST1H2AAQ96QV6 MIR4758-201ENST00000577688 71 ntBASIC17.01■□□□□ 0.31
HIST1H2AAQ96QV6 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.01■□□□□ 0.31
HIST1H2AAQ96QV6 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.01■□□□□ 0.31
HIST1H2AAQ96QV6 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.01■□□□□ 0.31
HIST1H2AAQ96QV6 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.01■□□□□ 0.31
HIST1H2AAQ96QV6 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.01■□□□□ 0.31
HIST1H2AAQ96QV6 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HIST1H2AAQ96QV6 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HIST1H2AAQ96QV6 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HIST1H2AAQ96QV6 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms