Protein–RNA interactions for Protein: Q96KR7

PHACTR3, Phosphatase and actin regulator 3, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3Q96KR7 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC25.87■■□□□ 1.73
PHACTR3Q96KR7 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC25.87■■□□□ 1.73
PHACTR3Q96KR7 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC25.86■■□□□ 1.73
PHACTR3Q96KR7 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC25.86■■□□□ 1.73
PHACTR3Q96KR7 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC25.86■■□□□ 1.73
PHACTR3Q96KR7 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PHACTR3Q96KR7 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC25.86■■□□□ 1.73
PHACTR3Q96KR7 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
PHACTR3Q96KR7 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC25.86■■□□□ 1.73
PHACTR3Q96KR7 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC25.86■■□□□ 1.73
PHACTR3Q96KR7 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PHACTR3Q96KR7 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PHACTR3Q96KR7 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PHACTR3Q96KR7 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PHACTR3Q96KR7 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC25.86■■□□□ 1.73
PHACTR3Q96KR7 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
PHACTR3Q96KR7 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PHACTR3Q96KR7 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
PHACTR3Q96KR7 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
PHACTR3Q96KR7 AC211429.1-201ENST00000415277 523 ntBASIC25.85■■□□□ 1.73
PHACTR3Q96KR7 AL355355.2-201ENST00000442321 338 ntBASIC25.85■■□□□ 1.73
PHACTR3Q96KR7 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC25.85■■□□□ 1.73
PHACTR3Q96KR7 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
PHACTR3Q96KR7 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC25.85■■□□□ 1.73
PHACTR3Q96KR7 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC25.85■■□□□ 1.73
PHACTR3Q96KR7 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PHACTR3Q96KR7 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC25.85■■□□□ 1.73
PHACTR3Q96KR7 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
PHACTR3Q96KR7 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC25.85■■□□□ 1.73
PHACTR3Q96KR7 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
PHACTR3Q96KR7 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC25.85■■□□□ 1.73
PHACTR3Q96KR7 GOLGA2P11-201ENST00000562660 1621 ntBASIC25.85■■□□□ 1.73
PHACTR3Q96KR7 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PHACTR3Q96KR7 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC25.84■■□□□ 1.73
PHACTR3Q96KR7 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PHACTR3Q96KR7 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PHACTR3Q96KR7 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
PHACTR3Q96KR7 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
PHACTR3Q96KR7 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC25.84■■□□□ 1.73
PHACTR3Q96KR7 MESTP1-201ENST00000404287 994 ntBASIC25.84■■□□□ 1.73
PHACTR3Q96KR7 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PHACTR3Q96KR7 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
PHACTR3Q96KR7 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC25.84■■□□□ 1.73
PHACTR3Q96KR7 RPS20-210ENST00000523936 899 ntTSL 2 BASIC25.84■■□□□ 1.73
PHACTR3Q96KR7 AC009237.14-201ENST00000609975 1594 ntBASIC25.84■■□□□ 1.73
PHACTR3Q96KR7 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC25.84■■□□□ 1.73
PHACTR3Q96KR7 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PHACTR3Q96KR7 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC25.84■■□□□ 1.73
PHACTR3Q96KR7 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC25.83■■□□□ 1.73
PHACTR3Q96KR7 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC25.83■■□□□ 1.73
PHACTR3Q96KR7 KRT16P1-201ENST00000399124 1418 ntBASIC25.83■■□□□ 1.73
PHACTR3Q96KR7 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC25.83■■□□□ 1.73
PHACTR3Q96KR7 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC25.83■■□□□ 1.73
PHACTR3Q96KR7 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC25.83■■□□□ 1.73
PHACTR3Q96KR7 HLA-A-209ENST00000638375 975 ntBASIC25.83■■□□□ 1.73
PHACTR3Q96KR7 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC25.83■■□□□ 1.73
PHACTR3Q96KR7 AC079598.2-202ENST00000546624 1451 ntBASIC25.83■■□□□ 1.73
PHACTR3Q96KR7 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC25.83■■□□□ 1.73
PHACTR3Q96KR7 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC25.83■■□□□ 1.72
PHACTR3Q96KR7 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
PHACTR3Q96KR7 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC25.82■■□□□ 1.72
PHACTR3Q96KR7 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC25.82■■□□□ 1.72
PHACTR3Q96KR7 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PHACTR3Q96KR7 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PHACTR3Q96KR7 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
PHACTR3Q96KR7 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC25.82■■□□□ 1.72
PHACTR3Q96KR7 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
PHACTR3Q96KR7 ECEL1P3-201ENST00000427961 737 ntBASIC25.82■■□□□ 1.72
PHACTR3Q96KR7 PPP1R14BP5-201ENST00000440334 435 ntBASIC25.82■■□□□ 1.72
PHACTR3Q96KR7 AC116562.2-201ENST00000507042 360 ntBASIC25.82■■□□□ 1.72
PHACTR3Q96KR7 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC25.82■■□□□ 1.72
PHACTR3Q96KR7 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC25.82■■□□□ 1.72
PHACTR3Q96KR7 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
PHACTR3Q96KR7 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC25.82■■□□□ 1.72
PHACTR3Q96KR7 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC25.82■■□□□ 1.72
PHACTR3Q96KR7 AL445675.2-201ENST00000620291 557 ntBASIC25.82■■□□□ 1.72
PHACTR3Q96KR7 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC25.82■■□□□ 1.72
PHACTR3Q96KR7 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PHACTR3Q96KR7 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
PHACTR3Q96KR7 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC25.82■■□□□ 1.72
PHACTR3Q96KR7 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC25.82■■□□□ 1.72
PHACTR3Q96KR7 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
PHACTR3Q96KR7 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
PHACTR3Q96KR7 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
PHACTR3Q96KR7 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC25.82■■□□□ 1.72
PHACTR3Q96KR7 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC25.81■■□□□ 1.72
PHACTR3Q96KR7 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
PHACTR3Q96KR7 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC25.81■■□□□ 1.72
PHACTR3Q96KR7 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PHACTR3Q96KR7 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC25.81■■□□□ 1.72
PHACTR3Q96KR7 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PHACTR3Q96KR7 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PHACTR3Q96KR7 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC25.81■■□□□ 1.72
PHACTR3Q96KR7 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC25.81■■□□□ 1.72
PHACTR3Q96KR7 RBM17P1-201ENST00000453646 1190 ntBASIC25.81■■□□□ 1.72
PHACTR3Q96KR7 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
PHACTR3Q96KR7 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC25.81■■□□□ 1.72
PHACTR3Q96KR7 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC25.81■■□□□ 1.72
PHACTR3Q96KR7 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
PHACTR3Q96KR7 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms