Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PDLIM5Q96HC4 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDLIM5Q96HC4 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDLIM5Q96HC4 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.23■□□□□ 0.67
PDLIM5Q96HC4 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.23■□□□□ 0.67
PDLIM5Q96HC4 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
PDLIM5Q96HC4 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PDLIM5Q96HC4 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PDLIM5Q96HC4 Z82202.1-201ENST00000623446 1880 ntBASIC19.23■□□□□ 0.67
PDLIM5Q96HC4 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.23■□□□□ 0.67
PDLIM5Q96HC4 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDLIM5Q96HC4 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.23■□□□□ 0.67
PDLIM5Q96HC4 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.23■□□□□ 0.67
PDLIM5Q96HC4 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.23■□□□□ 0.67
PDLIM5Q96HC4 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.23■□□□□ 0.67
PDLIM5Q96HC4 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.23■□□□□ 0.67
PDLIM5Q96HC4 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.23■□□□□ 0.67
PDLIM5Q96HC4 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.23■□□□□ 0.67
PDLIM5Q96HC4 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.23■□□□□ 0.67
PDLIM5Q96HC4 AL121906.2-201ENST00000621597 723 ntBASIC19.23■□□□□ 0.67
PDLIM5Q96HC4 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDLIM5Q96HC4 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDLIM5Q96HC4 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
PDLIM5Q96HC4 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDLIM5Q96HC4 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.23■□□□□ 0.67
PDLIM5Q96HC4 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
PDLIM5Q96HC4 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PDLIM5Q96HC4 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
PDLIM5Q96HC4 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDLIM5Q96HC4 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDLIM5Q96HC4 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDLIM5Q96HC4 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDLIM5Q96HC4 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.22■□□□□ 0.67
PDLIM5Q96HC4 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PDLIM5Q96HC4 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PDLIM5Q96HC4 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.22■□□□□ 0.67
PDLIM5Q96HC4 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.22■□□□□ 0.67
PDLIM5Q96HC4 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PDLIM5Q96HC4 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.22■□□□□ 0.67
PDLIM5Q96HC4 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PDLIM5Q96HC4 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.22■□□□□ 0.67
PDLIM5Q96HC4 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
PDLIM5Q96HC4 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.22■□□□□ 0.67
PDLIM5Q96HC4 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.22■□□□□ 0.67
PDLIM5Q96HC4 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PDLIM5Q96HC4 AL121829.2-201ENST00000620908 328 ntBASIC19.22■□□□□ 0.67
PDLIM5Q96HC4 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.22■□□□□ 0.67
PDLIM5Q96HC4 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PDLIM5Q96HC4 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDLIM5Q96HC4 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PDLIM5Q96HC4 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDLIM5Q96HC4 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PDLIM5Q96HC4 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.22■□□□□ 0.67
PDLIM5Q96HC4 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.22■□□□□ 0.67
PDLIM5Q96HC4 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDLIM5Q96HC4 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDLIM5Q96HC4 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.22■□□□□ 0.67
PDLIM5Q96HC4 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDLIM5Q96HC4 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
PDLIM5Q96HC4 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
PDLIM5Q96HC4 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDLIM5Q96HC4 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDLIM5Q96HC4 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PDLIM5Q96HC4 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.21■□□□□ 0.67
PDLIM5Q96HC4 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.21■□□□□ 0.67
PDLIM5Q96HC4 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
PDLIM5Q96HC4 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.21■□□□□ 0.67
PDLIM5Q96HC4 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.21■□□□□ 0.67
PDLIM5Q96HC4 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.21■□□□□ 0.67
PDLIM5Q96HC4 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDLIM5Q96HC4 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
PDLIM5Q96HC4 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
PDLIM5Q96HC4 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDLIM5Q96HC4 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
PDLIM5Q96HC4 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDLIM5Q96HC4 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.21■□□□□ 0.67
PDLIM5Q96HC4 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
PDLIM5Q96HC4 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PDLIM5Q96HC4 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDLIM5Q96HC4 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDLIM5Q96HC4 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
PDLIM5Q96HC4 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDLIM5Q96HC4 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PDLIM5Q96HC4 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.2■□□□□ 0.66
PDLIM5Q96HC4 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.2■□□□□ 0.66
PDLIM5Q96HC4 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PDLIM5Q96HC4 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
PDLIM5Q96HC4 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDLIM5Q96HC4 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.2■□□□□ 0.66
PDLIM5Q96HC4 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.2■□□□□ 0.66
PDLIM5Q96HC4 AC008687.6-201ENST00000596318 630 ntBASIC19.2■□□□□ 0.66
PDLIM5Q96HC4 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDLIM5Q96HC4 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PDLIM5Q96HC4 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PDLIM5Q96HC4 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDLIM5Q96HC4 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
PDLIM5Q96HC4 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PDLIM5Q96HC4 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDLIM5Q96HC4 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDLIM5Q96HC4 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms