Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.53■□□□□ 0.56
SLC47A1Q96FL8 NEFHP1-201ENST00000412845 2629 ntBASIC18.53■□□□□ 0.56
SLC47A1Q96FL8 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC47A1Q96FL8 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC47A1Q96FL8 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC47A1Q96FL8 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC47A1Q96FL8 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SLC47A1Q96FL8 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC47A1Q96FL8 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SLC47A1Q96FL8 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SLC47A1Q96FL8 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC47A1Q96FL8 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SLC47A1Q96FL8 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SLC47A1Q96FL8 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC47A1Q96FL8 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.52■□□□□ 0.56
SLC47A1Q96FL8 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.52■□□□□ 0.56
SLC47A1Q96FL8 AC016769.1-201ENST00000409132 1010 ntBASIC18.52■□□□□ 0.56
SLC47A1Q96FL8 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.52■□□□□ 0.56
SLC47A1Q96FL8 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.52■□□□□ 0.56
SLC47A1Q96FL8 AL162412.1-201ENST00000567129 965 ntBASIC18.52■□□□□ 0.56
SLC47A1Q96FL8 AC013268.1-206ENST00000638368 961 ntBASIC18.52■□□□□ 0.56
SLC47A1Q96FL8 AC112229.1-201ENST00000639295 961 ntBASIC18.52■□□□□ 0.56
SLC47A1Q96FL8 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC47A1Q96FL8 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.52■□□□□ 0.56
SLC47A1Q96FL8 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SLC47A1Q96FL8 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
SLC47A1Q96FL8 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
SLC47A1Q96FL8 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SLC47A1Q96FL8 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SLC47A1Q96FL8 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SLC47A1Q96FL8 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SLC47A1Q96FL8 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.52■□□□□ 0.55
SLC47A1Q96FL8 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SLC47A1Q96FL8 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SLC47A1Q96FL8 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.52■□□□□ 0.55
SLC47A1Q96FL8 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC47A1Q96FL8 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC47A1Q96FL8 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC47A1Q96FL8 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.51■□□□□ 0.55
SLC47A1Q96FL8 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.51■□□□□ 0.55
SLC47A1Q96FL8 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SLC47A1Q96FL8 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SLC47A1Q96FL8 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
SLC47A1Q96FL8 AC026271.2-201ENST00000428091 497 ntBASIC18.51■□□□□ 0.55
SLC47A1Q96FL8 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.51■□□□□ 0.55
SLC47A1Q96FL8 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SLC47A1Q96FL8 AC007322.4-201ENST00000509611 723 ntBASIC18.51■□□□□ 0.55
SLC47A1Q96FL8 RARRES2P6-201ENST00000567333 442 ntBASIC18.51■□□□□ 0.55
SLC47A1Q96FL8 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC47A1Q96FL8 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.51■□□□□ 0.55
SLC47A1Q96FL8 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.51■□□□□ 0.55
SLC47A1Q96FL8 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SLC47A1Q96FL8 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.51■□□□□ 0.55
SLC47A1Q96FL8 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC47A1Q96FL8 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC47A1Q96FL8 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
SLC47A1Q96FL8 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC47A1Q96FL8 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
SLC47A1Q96FL8 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC47A1Q96FL8 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC47A1Q96FL8 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
SLC47A1Q96FL8 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SLC47A1Q96FL8 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC47A1Q96FL8 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SLC47A1Q96FL8 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
SLC47A1Q96FL8 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC47A1Q96FL8 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC47A1Q96FL8 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC47A1Q96FL8 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
SLC47A1Q96FL8 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC47A1Q96FL8 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC47A1Q96FL8 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC47A1Q96FL8 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
SLC47A1Q96FL8 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.5■□□□□ 0.55
SLC47A1Q96FL8 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.5■□□□□ 0.55
SLC47A1Q96FL8 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.5■□□□□ 0.55
SLC47A1Q96FL8 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.5■□□□□ 0.55
SLC47A1Q96FL8 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SLC47A1Q96FL8 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
SLC47A1Q96FL8 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SLC47A1Q96FL8 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC47A1Q96FL8 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
SLC47A1Q96FL8 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SLC47A1Q96FL8 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC47A1Q96FL8 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.5■□□□□ 0.55
SLC47A1Q96FL8 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
SLC47A1Q96FL8 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
SLC47A1Q96FL8 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.49■□□□□ 0.55
SLC47A1Q96FL8 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SLC47A1Q96FL8 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
SLC47A1Q96FL8 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC47A1Q96FL8 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
SLC47A1Q96FL8 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.49■□□□□ 0.55
SLC47A1Q96FL8 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC47A1Q96FL8 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC47A1Q96FL8 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.49■□□□□ 0.55
SLC47A1Q96FL8 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC47A1Q96FL8 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC47A1Q96FL8 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC47A1Q96FL8 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms