Protein–RNA interactions for Protein: Q96EA4

SPDL1, Protein Spindly, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDL1Q96EA4 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SPDL1Q96EA4 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
SPDL1Q96EA4 KRT8P36-201ENST00000489121 1440 ntBASIC19.33■□□□□ 0.68
SPDL1Q96EA4 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.68
SPDL1Q96EA4 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.33■□□□□ 0.68
SPDL1Q96EA4 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.33■□□□□ 0.68
SPDL1Q96EA4 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
SPDL1Q96EA4 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SPDL1Q96EA4 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SPDL1Q96EA4 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SPDL1Q96EA4 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
SPDL1Q96EA4 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SPDL1Q96EA4 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SPDL1Q96EA4 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SPDL1Q96EA4 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SPDL1Q96EA4 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SPDL1Q96EA4 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SPDL1Q96EA4 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
SPDL1Q96EA4 IRS3P-201ENST00000223076 1006 ntBASIC19.32■□□□□ 0.68
SPDL1Q96EA4 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
SPDL1Q96EA4 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.32■□□□□ 0.68
SPDL1Q96EA4 DUX4L2-201ENST00000561772 1275 ntBASIC19.32■□□□□ 0.68
SPDL1Q96EA4 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
SPDL1Q96EA4 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.32■□□□□ 0.68
SPDL1Q96EA4 DUX4L6-201ENST00000626483 1275 ntBASIC19.32■□□□□ 0.68
SPDL1Q96EA4 DUX4L1-201ENST00000627662 1275 ntBASIC19.32■□□□□ 0.68
SPDL1Q96EA4 DUX4L8-201ENST00000629013 1275 ntBASIC19.32■□□□□ 0.68
SPDL1Q96EA4 DUX4L3-201ENST00000630187 1275 ntBASIC19.32■□□□□ 0.68
SPDL1Q96EA4 DUX4L7-201ENST00000630678 1275 ntBASIC19.32■□□□□ 0.68
SPDL1Q96EA4 DUX4L5-201ENST00000630834 1275 ntBASIC19.32■□□□□ 0.68
SPDL1Q96EA4 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
SPDL1Q96EA4 AL691432.2-201ENST00000607222 2038 ntBASIC19.32■□□□□ 0.68
SPDL1Q96EA4 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SPDL1Q96EA4 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SPDL1Q96EA4 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SPDL1Q96EA4 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SPDL1Q96EA4 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SPDL1Q96EA4 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SPDL1Q96EA4 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SPDL1Q96EA4 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SPDL1Q96EA4 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SPDL1Q96EA4 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SPDL1Q96EA4 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SPDL1Q96EA4 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SPDL1Q96EA4 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SPDL1Q96EA4 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SPDL1Q96EA4 SUDS3P1-201ENST00000505831 966 ntBASIC19.31■□□□□ 0.68
SPDL1Q96EA4 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.31■□□□□ 0.68
SPDL1Q96EA4 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SPDL1Q96EA4 TMEM179-206ENST00000616017 1645 ntBASIC19.31■□□□□ 0.68
SPDL1Q96EA4 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SPDL1Q96EA4 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SPDL1Q96EA4 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
SPDL1Q96EA4 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
SPDL1Q96EA4 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SPDL1Q96EA4 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.31■□□□□ 0.68
SPDL1Q96EA4 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.31■□□□□ 0.68
SPDL1Q96EA4 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.31■□□□□ 0.68
SPDL1Q96EA4 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.31■□□□□ 0.68
SPDL1Q96EA4 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SPDL1Q96EA4 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SPDL1Q96EA4 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SPDL1Q96EA4 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
SPDL1Q96EA4 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
SPDL1Q96EA4 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SPDL1Q96EA4 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SPDL1Q96EA4 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
SPDL1Q96EA4 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SPDL1Q96EA4 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SPDL1Q96EA4 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.3■□□□□ 0.68
SPDL1Q96EA4 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.3■□□□□ 0.68
SPDL1Q96EA4 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.3■□□□□ 0.68
SPDL1Q96EA4 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.3■□□□□ 0.68
SPDL1Q96EA4 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
SPDL1Q96EA4 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.3■□□□□ 0.68
SPDL1Q96EA4 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SPDL1Q96EA4 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SPDL1Q96EA4 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.3■□□□□ 0.68
SPDL1Q96EA4 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SPDL1Q96EA4 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SPDL1Q96EA4 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC19.3■□□□□ 0.68
SPDL1Q96EA4 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
SPDL1Q96EA4 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC19.3■□□□□ 0.68
SPDL1Q96EA4 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SPDL1Q96EA4 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SPDL1Q96EA4 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
SPDL1Q96EA4 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
SPDL1Q96EA4 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SPDL1Q96EA4 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
SPDL1Q96EA4 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.29■□□□□ 0.68
SPDL1Q96EA4 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.29■□□□□ 0.68
SPDL1Q96EA4 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SPDL1Q96EA4 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SPDL1Q96EA4 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SPDL1Q96EA4 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.29■□□□□ 0.68
SPDL1Q96EA4 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SPDL1Q96EA4 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SPDL1Q96EA4 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SPDL1Q96EA4 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.29■□□□□ 0.68
SPDL1Q96EA4 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms