Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SMIM4Q8WVI0 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMIM4Q8WVI0 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SMIM4Q8WVI0 BICD1-207ENST00000551848 1962 ntBASIC16.82■□□□□ 0.28
SMIM4Q8WVI0 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.82■□□□□ 0.28
SMIM4Q8WVI0 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SMIM4Q8WVI0 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMIM4Q8WVI0 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.82■□□□□ 0.28
SMIM4Q8WVI0 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMIM4Q8WVI0 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SMIM4Q8WVI0 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.81■□□□□ 0.28
SMIM4Q8WVI0 NOC2LP1-202ENST00000452600 2235 ntBASIC16.81■□□□□ 0.28
SMIM4Q8WVI0 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SMIM4Q8WVI0 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SMIM4Q8WVI0 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC16.81■□□□□ 0.28
SMIM4Q8WVI0 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC16.81■□□□□ 0.28
SMIM4Q8WVI0 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC16.81■□□□□ 0.28
SMIM4Q8WVI0 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SMIM4Q8WVI0 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SMIM4Q8WVI0 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMIM4Q8WVI0 AL354751.1-201ENST00000412768 1863 ntBASIC16.81■□□□□ 0.28
SMIM4Q8WVI0 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SMIM4Q8WVI0 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SMIM4Q8WVI0 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMIM4Q8WVI0 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SMIM4Q8WVI0 AP000997.3-201ENST00000623333 2250 ntBASIC16.81■□□□□ 0.28
SMIM4Q8WVI0 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.81■□□□□ 0.28
SMIM4Q8WVI0 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SMIM4Q8WVI0 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMIM4Q8WVI0 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SMIM4Q8WVI0 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMIM4Q8WVI0 KRT16P6-202ENST00000425692 1426 ntBASIC16.8■□□□□ 0.28
SMIM4Q8WVI0 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC16.8■□□□□ 0.28
SMIM4Q8WVI0 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SMIM4Q8WVI0 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMIM4Q8WVI0 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMIM4Q8WVI0 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SMIM4Q8WVI0 AL031598.1-201ENST00000561511 1773 ntBASIC16.8■□□□□ 0.28
SMIM4Q8WVI0 MPST-204ENST00000404393 1329 ntTSL 5 BASIC16.8■□□□□ 0.28
SMIM4Q8WVI0 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMIM4Q8WVI0 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SMIM4Q8WVI0 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SMIM4Q8WVI0 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SMIM4Q8WVI0 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC16.8■□□□□ 0.28
SMIM4Q8WVI0 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SMIM4Q8WVI0 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
SMIM4Q8WVI0 MIR572-201ENST00000384983 95 ntBASIC16.8■□□□□ 0.28
SMIM4Q8WVI0 SAPCD2P1-201ENST00000395413 1184 ntBASIC16.8■□□□□ 0.28
SMIM4Q8WVI0 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC16.8■□□□□ 0.28
SMIM4Q8WVI0 AC010141.2-201ENST00000452426 721 ntBASIC16.8■□□□□ 0.28
SMIM4Q8WVI0 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SMIM4Q8WVI0 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC16.8■□□□□ 0.28
SMIM4Q8WVI0 TPRG1LP1-201ENST00000598702 760 ntBASIC16.8■□□□□ 0.28
SMIM4Q8WVI0 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMIM4Q8WVI0 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SMIM4Q8WVI0 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.8■□□□□ 0.28
SMIM4Q8WVI0 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMIM4Q8WVI0 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMIM4Q8WVI0 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMIM4Q8WVI0 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SMIM4Q8WVI0 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMIM4Q8WVI0 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMIM4Q8WVI0 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.8■□□□□ 0.28
SMIM4Q8WVI0 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC16.8■□□□□ 0.28
SMIM4Q8WVI0 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC16.8■□□□□ 0.28
SMIM4Q8WVI0 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.8■□□□□ 0.28
SMIM4Q8WVI0 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMIM4Q8WVI0 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.8■□□□□ 0.28
SMIM4Q8WVI0 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.8■□□□□ 0.28
SMIM4Q8WVI0 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMIM4Q8WVI0 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMIM4Q8WVI0 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.79■□□□□ 0.28
SMIM4Q8WVI0 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SMIM4Q8WVI0 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.79■□□□□ 0.28
SMIM4Q8WVI0 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMIM4Q8WVI0 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.79■□□□□ 0.28
SMIM4Q8WVI0 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC16.79■□□□□ 0.28
SMIM4Q8WVI0 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMIM4Q8WVI0 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SMIM4Q8WVI0 PTBP1P-201ENST00000554374 1601 ntBASIC16.79■□□□□ 0.28
SMIM4Q8WVI0 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SMIM4Q8WVI0 PGM5P4-201ENST00000421970 445 ntBASIC16.79■□□□□ 0.28
SMIM4Q8WVI0 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC16.79■□□□□ 0.28
SMIM4Q8WVI0 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC16.79■□□□□ 0.28
SMIM4Q8WVI0 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC16.79■□□□□ 0.28
SMIM4Q8WVI0 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC16.79■□□□□ 0.28
SMIM4Q8WVI0 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMIM4Q8WVI0 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMIM4Q8WVI0 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMIM4Q8WVI0 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.79■□□□□ 0.28
SMIM4Q8WVI0 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMIM4Q8WVI0 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMIM4Q8WVI0 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMIM4Q8WVI0 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMIM4Q8WVI0 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SMIM4Q8WVI0 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SMIM4Q8WVI0 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.78■□□□□ 0.28
SMIM4Q8WVI0 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SMIM4Q8WVI0 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SMIM4Q8WVI0 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms