Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
CHD5Q8TDI0 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.97■□□□□ 0.79
CHD5Q8TDI0 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHD5Q8TDI0 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
CHD5Q8TDI0 RPS2P55-201ENST00000397318 883 ntBASIC19.97■□□□□ 0.79
CHD5Q8TDI0 AC107956.1-201ENST00000494359 873 ntBASIC19.97■□□□□ 0.79
CHD5Q8TDI0 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CHD5Q8TDI0 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.97■□□□□ 0.79
CHD5Q8TDI0 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.97■□□□□ 0.79
CHD5Q8TDI0 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.97■□□□□ 0.79
CHD5Q8TDI0 AL049637.2-201ENST00000641778 930 ntBASIC19.97■□□□□ 0.79
CHD5Q8TDI0 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHD5Q8TDI0 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CHD5Q8TDI0 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.97■□□□□ 0.79
CHD5Q8TDI0 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHD5Q8TDI0 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CHD5Q8TDI0 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CHD5Q8TDI0 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHD5Q8TDI0 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CHD5Q8TDI0 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.97■□□□□ 0.79
CHD5Q8TDI0 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHD5Q8TDI0 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHD5Q8TDI0 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHD5Q8TDI0 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHD5Q8TDI0 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHD5Q8TDI0 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CHD5Q8TDI0 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CHD5Q8TDI0 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.97■□□□□ 0.79
CHD5Q8TDI0 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.97■□□□□ 0.79
CHD5Q8TDI0 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHD5Q8TDI0 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.97■□□□□ 0.79
CHD5Q8TDI0 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHD5Q8TDI0 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CHD5Q8TDI0 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
CHD5Q8TDI0 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHD5Q8TDI0 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.96■□□□□ 0.79
CHD5Q8TDI0 KRT16P1-201ENST00000399124 1418 ntBASIC19.96■□□□□ 0.79
CHD5Q8TDI0 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHD5Q8TDI0 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CHD5Q8TDI0 TUBB8P6-201ENST00000436895 1288 ntBASIC19.96■□□□□ 0.79
CHD5Q8TDI0 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CHD5Q8TDI0 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHD5Q8TDI0 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHD5Q8TDI0 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CHD5Q8TDI0 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHD5Q8TDI0 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHD5Q8TDI0 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHD5Q8TDI0 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHD5Q8TDI0 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.96■□□□□ 0.79
CHD5Q8TDI0 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.96■□□□□ 0.79
CHD5Q8TDI0 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
CHD5Q8TDI0 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
CHD5Q8TDI0 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CHD5Q8TDI0 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.95■□□□□ 0.78
CHD5Q8TDI0 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.95■□□□□ 0.78
CHD5Q8TDI0 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHD5Q8TDI0 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.95■□□□□ 0.78
CHD5Q8TDI0 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHD5Q8TDI0 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHD5Q8TDI0 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
CHD5Q8TDI0 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CHD5Q8TDI0 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.95■□□□□ 0.78
CHD5Q8TDI0 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.95■□□□□ 0.78
CHD5Q8TDI0 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.95■□□□□ 0.78
CHD5Q8TDI0 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.95■□□□□ 0.78
CHD5Q8TDI0 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CHD5Q8TDI0 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.95■□□□□ 0.78
CHD5Q8TDI0 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHD5Q8TDI0 Z82202.1-201ENST00000623446 1880 ntBASIC19.95■□□□□ 0.78
CHD5Q8TDI0 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CHD5Q8TDI0 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CHD5Q8TDI0 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CHD5Q8TDI0 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.95■□□□□ 0.78
CHD5Q8TDI0 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHD5Q8TDI0 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
CHD5Q8TDI0 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHD5Q8TDI0 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHD5Q8TDI0 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CHD5Q8TDI0 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.94■□□□□ 0.78
CHD5Q8TDI0 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CHD5Q8TDI0 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.94■□□□□ 0.78
CHD5Q8TDI0 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.94■□□□□ 0.78
CHD5Q8TDI0 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.94■□□□□ 0.78
CHD5Q8TDI0 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.94■□□□□ 0.78
CHD5Q8TDI0 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.94■□□□□ 0.78
CHD5Q8TDI0 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHD5Q8TDI0 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CHD5Q8TDI0 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
CHD5Q8TDI0 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.94■□□□□ 0.78
CHD5Q8TDI0 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.94■□□□□ 0.78
CHD5Q8TDI0 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHD5Q8TDI0 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHD5Q8TDI0 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CHD5Q8TDI0 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CHD5Q8TDI0 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHD5Q8TDI0 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.94■□□□□ 0.78
CHD5Q8TDI0 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
CHD5Q8TDI0 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.94■□□□□ 0.78
CHD5Q8TDI0 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CHD5Q8TDI0 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms