Protein–RNA interactions for Protein: Q8TD43

TRPM4, Transient receptor potential cation channel subfamily M member 4, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4Q8TD43 PRSS44-201ENST00000515154 1146 ntBASIC23.42■■□□□ 1.34
TRPM4Q8TD43 NDUFV2-AS1-203ENST00000608008 779 ntBASIC23.42■■□□□ 1.34
TRPM4Q8TD43 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC23.42■■□□□ 1.34
TRPM4Q8TD43 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC23.42■■□□□ 1.34
TRPM4Q8TD43 AL031432.5-201ENST00000641059 760 ntBASIC23.42■■□□□ 1.34
TRPM4Q8TD43 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
TRPM4Q8TD43 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC23.42■■□□□ 1.34
TRPM4Q8TD43 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
TRPM4Q8TD43 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TRPM4Q8TD43 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TRPM4Q8TD43 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC23.41■■□□□ 1.34
TRPM4Q8TD43 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TRPM4Q8TD43 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TRPM4Q8TD43 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
TRPM4Q8TD43 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC23.41■■□□□ 1.34
TRPM4Q8TD43 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
TRPM4Q8TD43 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC23.41■■□□□ 1.34
TRPM4Q8TD43 AC008622.2-201ENST00000617006 1229 ntBASIC23.41■■□□□ 1.34
TRPM4Q8TD43 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TRPM4Q8TD43 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
TRPM4Q8TD43 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
TRPM4Q8TD43 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TRPM4Q8TD43 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
TRPM4Q8TD43 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC23.4■■□□□ 1.34
TRPM4Q8TD43 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC23.4■■□□□ 1.34
TRPM4Q8TD43 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
TRPM4Q8TD43 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
TRPM4Q8TD43 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TRPM4Q8TD43 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TRPM4Q8TD43 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TRPM4Q8TD43 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC23.4■■□□□ 1.34
TRPM4Q8TD43 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
TRPM4Q8TD43 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC23.4■■□□□ 1.34
TRPM4Q8TD43 AC140113.3-201ENST00000605663 199 ntBASIC23.4■■□□□ 1.34
TRPM4Q8TD43 DFFB-212ENST00000625756 649 ntTSL 5 BASIC23.4■■□□□ 1.34
TRPM4Q8TD43 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TRPM4Q8TD43 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC23.4■■□□□ 1.34
TRPM4Q8TD43 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
TRPM4Q8TD43 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
TRPM4Q8TD43 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
TRPM4Q8TD43 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
TRPM4Q8TD43 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC23.39■■□□□ 1.34
TRPM4Q8TD43 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
TRPM4Q8TD43 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC23.39■■□□□ 1.34
TRPM4Q8TD43 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
TRPM4Q8TD43 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
TRPM4Q8TD43 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
TRPM4Q8TD43 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
TRPM4Q8TD43 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
TRPM4Q8TD43 DAP-202ENST00000432074 1048 ntTSL 2 BASIC23.39■■□□□ 1.33
TRPM4Q8TD43 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC23.39■■□□□ 1.33
TRPM4Q8TD43 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
TRPM4Q8TD43 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
TRPM4Q8TD43 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
TRPM4Q8TD43 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.39■■□□□ 1.33
TRPM4Q8TD43 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
TRPM4Q8TD43 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
TRPM4Q8TD43 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC23.39■■□□□ 1.33
TRPM4Q8TD43 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRPM4Q8TD43 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRPM4Q8TD43 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRPM4Q8TD43 PHGDH-210ENST00000641115 1638 ntBASIC23.38■■□□□ 1.33
TRPM4Q8TD43 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRPM4Q8TD43 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRPM4Q8TD43 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC23.38■■□□□ 1.33
TRPM4Q8TD43 DERL1-203ENST00000419562 918 ntTSL 2 BASIC23.38■■□□□ 1.33
TRPM4Q8TD43 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC23.38■■□□□ 1.33
TRPM4Q8TD43 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC23.38■■□□□ 1.33
TRPM4Q8TD43 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRPM4Q8TD43 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRPM4Q8TD43 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC23.38■■□□□ 1.33
TRPM4Q8TD43 FP700111.2-201ENST00000619190 1892 ntBASIC23.38■■□□□ 1.33
TRPM4Q8TD43 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC23.38■■□□□ 1.33
TRPM4Q8TD43 FBXW4P1-201ENST00000426721 2239 ntBASIC23.37■■□□□ 1.33
TRPM4Q8TD43 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TRPM4Q8TD43 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
TRPM4Q8TD43 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC23.37■■□□□ 1.33
TRPM4Q8TD43 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
TRPM4Q8TD43 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TRPM4Q8TD43 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TRPM4Q8TD43 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
TRPM4Q8TD43 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
TRPM4Q8TD43 FXN-203ENST00000396366 922 ntTSL 2 BASIC23.37■■□□□ 1.33
TRPM4Q8TD43 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
TRPM4Q8TD43 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TRPM4Q8TD43 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC23.37■■□□□ 1.33
TRPM4Q8TD43 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC23.37■■□□□ 1.33
TRPM4Q8TD43 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
TRPM4Q8TD43 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC23.37■■□□□ 1.33
TRPM4Q8TD43 VENTXP5-201ENST00000523979 775 ntBASIC23.37■■□□□ 1.33
TRPM4Q8TD43 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TRPM4Q8TD43 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TRPM4Q8TD43 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
TRPM4Q8TD43 ERF-202ENST00000440177 2032 ntTSL 2 BASIC23.37■■□□□ 1.33
TRPM4Q8TD43 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
TRPM4Q8TD43 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
TRPM4Q8TD43 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC23.36■■□□□ 1.33
TRPM4Q8TD43 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
TRPM4Q8TD43 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC23.36■■□□□ 1.33
TRPM4Q8TD43 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms