Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SHKBP1Q8TBC3 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SHKBP1Q8TBC3 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SHKBP1Q8TBC3 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.66■□□□□ 0.9
SHKBP1Q8TBC3 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.66■□□□□ 0.9
SHKBP1Q8TBC3 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.66■□□□□ 0.9
SHKBP1Q8TBC3 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SHKBP1Q8TBC3 UNC93B2-201ENST00000285383 730 ntBASIC20.66■□□□□ 0.9
SHKBP1Q8TBC3 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.66■□□□□ 0.9
SHKBP1Q8TBC3 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.66■□□□□ 0.9
SHKBP1Q8TBC3 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.66■□□□□ 0.9
SHKBP1Q8TBC3 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.66■□□□□ 0.9
SHKBP1Q8TBC3 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SHKBP1Q8TBC3 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SHKBP1Q8TBC3 KRT16P1-201ENST00000399124 1418 ntBASIC20.66■□□□□ 0.9
SHKBP1Q8TBC3 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SHKBP1Q8TBC3 AP006587.1-201ENST00000534129 1502 ntBASIC20.66■□□□□ 0.9
SHKBP1Q8TBC3 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.66■□□□□ 0.9
SHKBP1Q8TBC3 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.66■□□□□ 0.9
SHKBP1Q8TBC3 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.66■□□□□ 0.9
SHKBP1Q8TBC3 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.66■□□□□ 0.9
SHKBP1Q8TBC3 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.66■□□□□ 0.9
SHKBP1Q8TBC3 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SHKBP1Q8TBC3 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SHKBP1Q8TBC3 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SHKBP1Q8TBC3 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SHKBP1Q8TBC3 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SHKBP1Q8TBC3 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SHKBP1Q8TBC3 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
SHKBP1Q8TBC3 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.65■□□□□ 0.9
SHKBP1Q8TBC3 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
SHKBP1Q8TBC3 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.65■□□□□ 0.9
SHKBP1Q8TBC3 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SHKBP1Q8TBC3 AC116351.2-201ENST00000606540 1585 ntBASIC20.65■□□□□ 0.9
SHKBP1Q8TBC3 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SHKBP1Q8TBC3 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SHKBP1Q8TBC3 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SHKBP1Q8TBC3 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
SHKBP1Q8TBC3 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.65■□□□□ 0.9
SHKBP1Q8TBC3 AC116562.2-201ENST00000507042 360 ntBASIC20.65■□□□□ 0.9
SHKBP1Q8TBC3 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.65■□□□□ 0.9
SHKBP1Q8TBC3 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.65■□□□□ 0.9
SHKBP1Q8TBC3 MIR6786-201ENST00000616843 113 ntBASIC20.65■□□□□ 0.9
SHKBP1Q8TBC3 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.65■□□□□ 0.9
SHKBP1Q8TBC3 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.65■□□□□ 0.9
SHKBP1Q8TBC3 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.65■□□□□ 0.9
SHKBP1Q8TBC3 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.64■□□□□ 0.9
SHKBP1Q8TBC3 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
SHKBP1Q8TBC3 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SHKBP1Q8TBC3 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
SHKBP1Q8TBC3 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SHKBP1Q8TBC3 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SHKBP1Q8TBC3 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.64■□□□□ 0.89
SHKBP1Q8TBC3 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SHKBP1Q8TBC3 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20.64■□□□□ 0.89
SHKBP1Q8TBC3 MIR1238-201ENST00000408483 83 ntBASIC20.64■□□□□ 0.89
SHKBP1Q8TBC3 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SHKBP1Q8TBC3 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.64■□□□□ 0.89
SHKBP1Q8TBC3 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.64■□□□□ 0.89
SHKBP1Q8TBC3 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.64■□□□□ 0.89
SHKBP1Q8TBC3 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.64■□□□□ 0.89
SHKBP1Q8TBC3 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.64■□□□□ 0.89
SHKBP1Q8TBC3 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.64■□□□□ 0.89
SHKBP1Q8TBC3 C1QL1P1-201ENST00000568105 661 ntBASIC20.64■□□□□ 0.89
SHKBP1Q8TBC3 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.64■□□□□ 0.89
SHKBP1Q8TBC3 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SHKBP1Q8TBC3 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SHKBP1Q8TBC3 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SHKBP1Q8TBC3 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SHKBP1Q8TBC3 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.63■□□□□ 0.89
SHKBP1Q8TBC3 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SHKBP1Q8TBC3 TFP1-202ENST00000475455 1573 ntBASIC20.63■□□□□ 0.89
SHKBP1Q8TBC3 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SHKBP1Q8TBC3 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SHKBP1Q8TBC3 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.63■□□□□ 0.89
SHKBP1Q8TBC3 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SHKBP1Q8TBC3 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SHKBP1Q8TBC3 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.63■□□□□ 0.89
SHKBP1Q8TBC3 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.63■□□□□ 0.89
SHKBP1Q8TBC3 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SHKBP1Q8TBC3 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
SHKBP1Q8TBC3 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
SHKBP1Q8TBC3 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.63■□□□□ 0.89
SHKBP1Q8TBC3 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.63■□□□□ 0.89
SHKBP1Q8TBC3 AC092720.2-201ENST00000602388 1665 ntBASIC20.63■□□□□ 0.89
SHKBP1Q8TBC3 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SHKBP1Q8TBC3 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SHKBP1Q8TBC3 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SHKBP1Q8TBC3 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SHKBP1Q8TBC3 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SHKBP1Q8TBC3 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SHKBP1Q8TBC3 KRT16P6-202ENST00000425692 1426 ntBASIC20.62■□□□□ 0.89
SHKBP1Q8TBC3 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.62■□□□□ 0.89
SHKBP1Q8TBC3 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SHKBP1Q8TBC3 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SHKBP1Q8TBC3 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.62■□□□□ 0.89
SHKBP1Q8TBC3 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SHKBP1Q8TBC3 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.62■□□□□ 0.89
SHKBP1Q8TBC3 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SHKBP1Q8TBC3 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms