Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.32■□□□□ 0.68
HMGCLL1Q8TB92 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HMGCLL1Q8TB92 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HMGCLL1Q8TB92 KRT16P6-202ENST00000425692 1426 ntBASIC19.32■□□□□ 0.68
HMGCLL1Q8TB92 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HMGCLL1Q8TB92 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.32■□□□□ 0.68
HMGCLL1Q8TB92 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HMGCLL1Q8TB92 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.31■□□□□ 0.68
HMGCLL1Q8TB92 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
HMGCLL1Q8TB92 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HMGCLL1Q8TB92 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HMGCLL1Q8TB92 AC004408.2-201ENST00000623613 2777 ntBASIC19.31■□□□□ 0.68
HMGCLL1Q8TB92 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HMGCLL1Q8TB92 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
HMGCLL1Q8TB92 AC026366.1-201ENST00000488803 879 ntBASIC19.31■□□□□ 0.68
HMGCLL1Q8TB92 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.31■□□□□ 0.68
HMGCLL1Q8TB92 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.31■□□□□ 0.68
HMGCLL1Q8TB92 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HMGCLL1Q8TB92 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HMGCLL1Q8TB92 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
HMGCLL1Q8TB92 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HMGCLL1Q8TB92 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HMGCLL1Q8TB92 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.3■□□□□ 0.68
HMGCLL1Q8TB92 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HMGCLL1Q8TB92 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
HMGCLL1Q8TB92 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
HMGCLL1Q8TB92 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HMGCLL1Q8TB92 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.3■□□□□ 0.68
HMGCLL1Q8TB92 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HMGCLL1Q8TB92 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HMGCLL1Q8TB92 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HMGCLL1Q8TB92 AP003097.1-201ENST00000530657 1135 ntBASIC19.3■□□□□ 0.68
HMGCLL1Q8TB92 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.3■□□□□ 0.68
HMGCLL1Q8TB92 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
HMGCLL1Q8TB92 AC008687.6-201ENST00000596318 630 ntBASIC19.3■□□□□ 0.68
HMGCLL1Q8TB92 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.3■□□□□ 0.68
HMGCLL1Q8TB92 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HMGCLL1Q8TB92 AC120498.8-201ENST00000614275 531 ntBASIC19.3■□□□□ 0.68
HMGCLL1Q8TB92 AC006557.6-201ENST00000623071 864 ntBASIC19.3■□□□□ 0.68
HMGCLL1Q8TB92 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.3■□□□□ 0.68
HMGCLL1Q8TB92 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HMGCLL1Q8TB92 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HMGCLL1Q8TB92 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
HMGCLL1Q8TB92 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HMGCLL1Q8TB92 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.3■□□□□ 0.68
HMGCLL1Q8TB92 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
HMGCLL1Q8TB92 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
HMGCLL1Q8TB92 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
HMGCLL1Q8TB92 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.3■□□□□ 0.68
HMGCLL1Q8TB92 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HMGCLL1Q8TB92 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
HMGCLL1Q8TB92 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
HMGCLL1Q8TB92 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
HMGCLL1Q8TB92 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
HMGCLL1Q8TB92 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
HMGCLL1Q8TB92 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
HMGCLL1Q8TB92 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.29■□□□□ 0.68
HMGCLL1Q8TB92 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HMGCLL1Q8TB92 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HMGCLL1Q8TB92 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.29■□□□□ 0.68
HMGCLL1Q8TB92 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HMGCLL1Q8TB92 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
HMGCLL1Q8TB92 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
HMGCLL1Q8TB92 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.29■□□□□ 0.68
HMGCLL1Q8TB92 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.29■□□□□ 0.68
HMGCLL1Q8TB92 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.29■□□□□ 0.68
HMGCLL1Q8TB92 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.29■□□□□ 0.68
HMGCLL1Q8TB92 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
HMGCLL1Q8TB92 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
HMGCLL1Q8TB92 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
HMGCLL1Q8TB92 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
HMGCLL1Q8TB92 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HMGCLL1Q8TB92 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HMGCLL1Q8TB92 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HMGCLL1Q8TB92 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
HMGCLL1Q8TB92 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.28■□□□□ 0.68
HMGCLL1Q8TB92 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
HMGCLL1Q8TB92 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HMGCLL1Q8TB92 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HMGCLL1Q8TB92 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.28■□□□□ 0.68
HMGCLL1Q8TB92 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HMGCLL1Q8TB92 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.28■□□□□ 0.68
HMGCLL1Q8TB92 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.28■□□□□ 0.68
HMGCLL1Q8TB92 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
HMGCLL1Q8TB92 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HMGCLL1Q8TB92 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HMGCLL1Q8TB92 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.28■□□□□ 0.68
HMGCLL1Q8TB92 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.28■□□□□ 0.68
HMGCLL1Q8TB92 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HMGCLL1Q8TB92 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
HMGCLL1Q8TB92 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
HMGCLL1Q8TB92 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HMGCLL1Q8TB92 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
HMGCLL1Q8TB92 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HMGCLL1Q8TB92 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
HMGCLL1Q8TB92 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HMGCLL1Q8TB92 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HMGCLL1Q8TB92 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HMGCLL1Q8TB92 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HMGCLL1Q8TB92 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms