Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.52■□□□□ 0.56
SIMC1Q8NDZ2 SOX15-203ENST00000570788 1093 ntBASIC18.52■□□□□ 0.56
SIMC1Q8NDZ2 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.52■□□□□ 0.56
SIMC1Q8NDZ2 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
SIMC1Q8NDZ2 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.52■□□□□ 0.56
SIMC1Q8NDZ2 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.52■□□□□ 0.56
SIMC1Q8NDZ2 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.52■□□□□ 0.56
SIMC1Q8NDZ2 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SIMC1Q8NDZ2 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SIMC1Q8NDZ2 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.52■□□□□ 0.55
SIMC1Q8NDZ2 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.52■□□□□ 0.55
SIMC1Q8NDZ2 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SIMC1Q8NDZ2 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
SIMC1Q8NDZ2 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SIMC1Q8NDZ2 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
SIMC1Q8NDZ2 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SIMC1Q8NDZ2 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.51■□□□□ 0.55
SIMC1Q8NDZ2 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
SIMC1Q8NDZ2 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SIMC1Q8NDZ2 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
SIMC1Q8NDZ2 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.51■□□□□ 0.55
SIMC1Q8NDZ2 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
SIMC1Q8NDZ2 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SIMC1Q8NDZ2 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SIMC1Q8NDZ2 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SIMC1Q8NDZ2 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SIMC1Q8NDZ2 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SIMC1Q8NDZ2 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.51■□□□□ 0.55
SIMC1Q8NDZ2 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SIMC1Q8NDZ2 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.51■□□□□ 0.55
SIMC1Q8NDZ2 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.51■□□□□ 0.55
SIMC1Q8NDZ2 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.51■□□□□ 0.55
SIMC1Q8NDZ2 AL390719.1-204ENST00000412397 1219 ntBASIC18.51■□□□□ 0.55
SIMC1Q8NDZ2 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.51■□□□□ 0.55
SIMC1Q8NDZ2 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SIMC1Q8NDZ2 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
SIMC1Q8NDZ2 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SIMC1Q8NDZ2 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
SIMC1Q8NDZ2 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.51■□□□□ 0.55
SIMC1Q8NDZ2 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
SIMC1Q8NDZ2 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.51■□□□□ 0.55
SIMC1Q8NDZ2 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.51■□□□□ 0.55
SIMC1Q8NDZ2 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SIMC1Q8NDZ2 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SIMC1Q8NDZ2 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SIMC1Q8NDZ2 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SIMC1Q8NDZ2 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SIMC1Q8NDZ2 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SIMC1Q8NDZ2 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SIMC1Q8NDZ2 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SIMC1Q8NDZ2 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.5■□□□□ 0.55
SIMC1Q8NDZ2 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.5■□□□□ 0.55
SIMC1Q8NDZ2 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
SIMC1Q8NDZ2 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.5■□□□□ 0.55
SIMC1Q8NDZ2 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.5■□□□□ 0.55
SIMC1Q8NDZ2 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.5■□□□□ 0.55
SIMC1Q8NDZ2 AC008403.3-201ENST00000598924 454 ntBASIC18.5■□□□□ 0.55
SIMC1Q8NDZ2 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SIMC1Q8NDZ2 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SIMC1Q8NDZ2 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SIMC1Q8NDZ2 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SIMC1Q8NDZ2 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
SIMC1Q8NDZ2 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SIMC1Q8NDZ2 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SIMC1Q8NDZ2 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.5■□□□□ 0.55
SIMC1Q8NDZ2 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.5■□□□□ 0.55
SIMC1Q8NDZ2 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
SIMC1Q8NDZ2 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
SIMC1Q8NDZ2 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SIMC1Q8NDZ2 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SIMC1Q8NDZ2 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.49■□□□□ 0.55
SIMC1Q8NDZ2 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
SIMC1Q8NDZ2 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SIMC1Q8NDZ2 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SIMC1Q8NDZ2 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SIMC1Q8NDZ2 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SIMC1Q8NDZ2 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.49■□□□□ 0.55
SIMC1Q8NDZ2 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SIMC1Q8NDZ2 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SIMC1Q8NDZ2 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.49■□□□□ 0.55
SIMC1Q8NDZ2 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SIMC1Q8NDZ2 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.49■□□□□ 0.55
SIMC1Q8NDZ2 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
SIMC1Q8NDZ2 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SIMC1Q8NDZ2 CD99P1-205ENST00000527459 561 ntBASIC18.49■□□□□ 0.55
SIMC1Q8NDZ2 UNC93B5-201ENST00000530315 699 ntBASIC18.49■□□□□ 0.55
SIMC1Q8NDZ2 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.49■□□□□ 0.55
SIMC1Q8NDZ2 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
SIMC1Q8NDZ2 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.49■□□□□ 0.55
SIMC1Q8NDZ2 MIR4651-201ENST00000582622 73 ntBASIC18.49■□□□□ 0.55
SIMC1Q8NDZ2 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SIMC1Q8NDZ2 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
SIMC1Q8NDZ2 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SIMC1Q8NDZ2 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SIMC1Q8NDZ2 PHGDH-210ENST00000641115 1638 ntBASIC18.49■□□□□ 0.55
SIMC1Q8NDZ2 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SIMC1Q8NDZ2 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SIMC1Q8NDZ2 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
SIMC1Q8NDZ2 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SIMC1Q8NDZ2 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms