Protein–RNA interactions for Protein: Q8NCS4

TMEM35B, Transmembrane protein 35B, humanhuman

Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35BQ8NCS4 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.86■□□□□ 0.93
TMEM35BQ8NCS4 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TMEM35BQ8NCS4 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.85■□□□□ 0.93
TMEM35BQ8NCS4 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.85■□□□□ 0.93
TMEM35BQ8NCS4 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.85■□□□□ 0.93
TMEM35BQ8NCS4 RNA5SP413-201ENST00000516373 109 ntBASIC20.85■□□□□ 0.93
TMEM35BQ8NCS4 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TMEM35BQ8NCS4 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
TMEM35BQ8NCS4 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TMEM35BQ8NCS4 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TMEM35BQ8NCS4 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TMEM35BQ8NCS4 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TMEM35BQ8NCS4 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TMEM35BQ8NCS4 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.85■□□□□ 0.93
TMEM35BQ8NCS4 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TMEM35BQ8NCS4 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
TMEM35BQ8NCS4 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TMEM35BQ8NCS4 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TMEM35BQ8NCS4 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.84■□□□□ 0.93
TMEM35BQ8NCS4 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
TMEM35BQ8NCS4 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
TMEM35BQ8NCS4 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TMEM35BQ8NCS4 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
TMEM35BQ8NCS4 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
TMEM35BQ8NCS4 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
TMEM35BQ8NCS4 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
TMEM35BQ8NCS4 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.84■□□□□ 0.93
TMEM35BQ8NCS4 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
TMEM35BQ8NCS4 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.84■□□□□ 0.93
TMEM35BQ8NCS4 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.84■□□□□ 0.93
TMEM35BQ8NCS4 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.84■□□□□ 0.93
TMEM35BQ8NCS4 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.84■□□□□ 0.93
TMEM35BQ8NCS4 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TMEM35BQ8NCS4 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TMEM35BQ8NCS4 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.84■□□□□ 0.93
TMEM35BQ8NCS4 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
TMEM35BQ8NCS4 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.84■□□□□ 0.93
TMEM35BQ8NCS4 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TMEM35BQ8NCS4 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TMEM35BQ8NCS4 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
TMEM35BQ8NCS4 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
TMEM35BQ8NCS4 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.83■□□□□ 0.93
TMEM35BQ8NCS4 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.83■□□□□ 0.93
TMEM35BQ8NCS4 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.83■□□□□ 0.93
TMEM35BQ8NCS4 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.83■□□□□ 0.93
TMEM35BQ8NCS4 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.83■□□□□ 0.93
TMEM35BQ8NCS4 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TMEM35BQ8NCS4 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
TMEM35BQ8NCS4 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.83■□□□□ 0.92
TMEM35BQ8NCS4 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
TMEM35BQ8NCS4 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
TMEM35BQ8NCS4 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TMEM35BQ8NCS4 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TMEM35BQ8NCS4 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TMEM35BQ8NCS4 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.82■□□□□ 0.92
TMEM35BQ8NCS4 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TMEM35BQ8NCS4 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TMEM35BQ8NCS4 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
TMEM35BQ8NCS4 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TMEM35BQ8NCS4 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TMEM35BQ8NCS4 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TMEM35BQ8NCS4 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
TMEM35BQ8NCS4 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
TMEM35BQ8NCS4 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TMEM35BQ8NCS4 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TMEM35BQ8NCS4 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TMEM35BQ8NCS4 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.82■□□□□ 0.92
TMEM35BQ8NCS4 KRT18P6-201ENST00000555540 1265 ntBASIC20.82■□□□□ 0.92
TMEM35BQ8NCS4 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.82■□□□□ 0.92
TMEM35BQ8NCS4 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TMEM35BQ8NCS4 AL121829.2-201ENST00000620908 328 ntBASIC20.82■□□□□ 0.92
TMEM35BQ8NCS4 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TMEM35BQ8NCS4 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
TMEM35BQ8NCS4 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TMEM35BQ8NCS4 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.81■□□□□ 0.92
TMEM35BQ8NCS4 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TMEM35BQ8NCS4 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.81■□□□□ 0.92
TMEM35BQ8NCS4 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.81■□□□□ 0.92
TMEM35BQ8NCS4 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.81■□□□□ 0.92
TMEM35BQ8NCS4 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TMEM35BQ8NCS4 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TMEM35BQ8NCS4 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.81■□□□□ 0.92
TMEM35BQ8NCS4 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.81■□□□□ 0.92
TMEM35BQ8NCS4 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
TMEM35BQ8NCS4 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TMEM35BQ8NCS4 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.81■□□□□ 0.92
TMEM35BQ8NCS4 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TMEM35BQ8NCS4 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TMEM35BQ8NCS4 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.81■□□□□ 0.92
TMEM35BQ8NCS4 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TMEM35BQ8NCS4 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
TMEM35BQ8NCS4 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TMEM35BQ8NCS4 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TMEM35BQ8NCS4 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
TMEM35BQ8NCS4 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TMEM35BQ8NCS4 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TMEM35BQ8NCS4 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.8■□□□□ 0.92
TMEM35BQ8NCS4 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TMEM35BQ8NCS4 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TMEM35BQ8NCS4 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms