Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.98■□□□□ 0.63
LINC01555Q8NAE3 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LINC01555Q8NAE3 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
LINC01555Q8NAE3 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LINC01555Q8NAE3 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LINC01555Q8NAE3 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LINC01555Q8NAE3 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LINC01555Q8NAE3 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
LINC01555Q8NAE3 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
LINC01555Q8NAE3 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LINC01555Q8NAE3 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LINC01555Q8NAE3 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LINC01555Q8NAE3 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.97■□□□□ 0.63
LINC01555Q8NAE3 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LINC01555Q8NAE3 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
LINC01555Q8NAE3 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LINC01555Q8NAE3 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
LINC01555Q8NAE3 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
LINC01555Q8NAE3 KRT16P5-201ENST00000455284 522 ntBASIC18.97■□□□□ 0.63
LINC01555Q8NAE3 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
LINC01555Q8NAE3 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
LINC01555Q8NAE3 KRT18P16-201ENST00000510337 1294 ntBASIC18.97■□□□□ 0.63
LINC01555Q8NAE3 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.97■□□□□ 0.63
LINC01555Q8NAE3 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.97■□□□□ 0.63
LINC01555Q8NAE3 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.97■□□□□ 0.63
LINC01555Q8NAE3 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.97■□□□□ 0.63
LINC01555Q8NAE3 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LINC01555Q8NAE3 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LINC01555Q8NAE3 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.97■□□□□ 0.63
LINC01555Q8NAE3 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
LINC01555Q8NAE3 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LINC01555Q8NAE3 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LINC01555Q8NAE3 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
LINC01555Q8NAE3 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LINC01555Q8NAE3 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
LINC01555Q8NAE3 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
LINC01555Q8NAE3 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
LINC01555Q8NAE3 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.96■□□□□ 0.63
LINC01555Q8NAE3 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LINC01555Q8NAE3 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.96■□□□□ 0.63
LINC01555Q8NAE3 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LINC01555Q8NAE3 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LINC01555Q8NAE3 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LINC01555Q8NAE3 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.96■□□□□ 0.63
LINC01555Q8NAE3 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
LINC01555Q8NAE3 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
LINC01555Q8NAE3 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.96■□□□□ 0.63
LINC01555Q8NAE3 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.96■□□□□ 0.63
LINC01555Q8NAE3 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.96■□□□□ 0.63
LINC01555Q8NAE3 AC004264.1-201ENST00000608354 794 ntBASIC18.96■□□□□ 0.63
LINC01555Q8NAE3 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.96■□□□□ 0.63
LINC01555Q8NAE3 AFG3L1P-217ENST00000557444 2447 ntBASIC18.96■□□□□ 0.63
LINC01555Q8NAE3 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LINC01555Q8NAE3 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LINC01555Q8NAE3 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.96■□□□□ 0.63
LINC01555Q8NAE3 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.96■□□□□ 0.63
LINC01555Q8NAE3 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
LINC01555Q8NAE3 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LINC01555Q8NAE3 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
LINC01555Q8NAE3 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LINC01555Q8NAE3 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.95■□□□□ 0.62
LINC01555Q8NAE3 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LINC01555Q8NAE3 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
LINC01555Q8NAE3 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.95■□□□□ 0.62
LINC01555Q8NAE3 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LINC01555Q8NAE3 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.95■□□□□ 0.62
LINC01555Q8NAE3 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LINC01555Q8NAE3 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
LINC01555Q8NAE3 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
LINC01555Q8NAE3 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.95■□□□□ 0.62
LINC01555Q8NAE3 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
LINC01555Q8NAE3 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
LINC01555Q8NAE3 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LINC01555Q8NAE3 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.95■□□□□ 0.62
LINC01555Q8NAE3 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LINC01555Q8NAE3 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
LINC01555Q8NAE3 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
LINC01555Q8NAE3 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LINC01555Q8NAE3 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
LINC01555Q8NAE3 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LINC01555Q8NAE3 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.94■□□□□ 0.62
LINC01555Q8NAE3 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.94■□□□□ 0.62
LINC01555Q8NAE3 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
LINC01555Q8NAE3 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LINC01555Q8NAE3 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.94■□□□□ 0.62
LINC01555Q8NAE3 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LINC01555Q8NAE3 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.94■□□□□ 0.62
LINC01555Q8NAE3 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.94■□□□□ 0.62
LINC01555Q8NAE3 AC066615.1-201ENST00000640911 628 ntBASIC18.94■□□□□ 0.62
LINC01555Q8NAE3 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LINC01555Q8NAE3 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LINC01555Q8NAE3 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.94■□□□□ 0.62
LINC01555Q8NAE3 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LINC01555Q8NAE3 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.94■□□□□ 0.62
LINC01555Q8NAE3 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
LINC01555Q8NAE3 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
LINC01555Q8NAE3 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LINC01555Q8NAE3 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
LINC01555Q8NAE3 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LINC01555Q8NAE3 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms