Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COMMD1Q8N668 AL512625.2-201ENST00000417533 625 ntBASIC16.29■□□□□ 0.2
COMMD1Q8N668 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
COMMD1Q8N668 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
COMMD1Q8N668 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
COMMD1Q8N668 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COMMD1Q8N668 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
COMMD1Q8N668 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COMMD1Q8N668 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COMMD1Q8N668 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COMMD1Q8N668 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COMMD1Q8N668 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COMMD1Q8N668 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
COMMD1Q8N668 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
COMMD1Q8N668 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
COMMD1Q8N668 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
COMMD1Q8N668 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
COMMD1Q8N668 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.29■□□□□ 0.2
COMMD1Q8N668 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COMMD1Q8N668 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.29■□□□□ 0.2
COMMD1Q8N668 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
COMMD1Q8N668 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COMMD1Q8N668 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COMMD1Q8N668 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COMMD1Q8N668 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COMMD1Q8N668 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COMMD1Q8N668 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COMMD1Q8N668 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
COMMD1Q8N668 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COMMD1Q8N668 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
COMMD1Q8N668 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COMMD1Q8N668 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COMMD1Q8N668 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COMMD1Q8N668 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
COMMD1Q8N668 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.28■□□□□ 0.2
COMMD1Q8N668 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COMMD1Q8N668 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COMMD1Q8N668 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC16.28■□□□□ 0.2
COMMD1Q8N668 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
COMMD1Q8N668 AC105036.2-201ENST00000569468 176 ntBASIC16.28■□□□□ 0.2
COMMD1Q8N668 WT1-AS_3.1-201ENST00000613262 234 ntBASIC16.28■□□□□ 0.2
COMMD1Q8N668 AL050303.2-201ENST00000619798 666 ntBASIC16.28■□□□□ 0.2
COMMD1Q8N668 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
COMMD1Q8N668 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC16.28■□□□□ 0.2
COMMD1Q8N668 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
COMMD1Q8N668 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
COMMD1Q8N668 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC16.28■□□□□ 0.2
COMMD1Q8N668 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC16.28■□□□□ 0.2
COMMD1Q8N668 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COMMD1Q8N668 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
COMMD1Q8N668 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COMMD1Q8N668 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COMMD1Q8N668 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COMMD1Q8N668 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
COMMD1Q8N668 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COMMD1Q8N668 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
COMMD1Q8N668 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
COMMD1Q8N668 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COMMD1Q8N668 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
COMMD1Q8N668 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COMMD1Q8N668 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
COMMD1Q8N668 METTL15-202ENST00000403099 795 ntTSL 5 BASIC16.27■□□□□ 0.2
COMMD1Q8N668 UQCRFS1P1-201ENST00000435169 820 ntBASIC16.27■□□□□ 0.2
COMMD1Q8N668 TSPY6P-201ENST00000448518 926 ntBASIC16.27■□□□□ 0.2
COMMD1Q8N668 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
COMMD1Q8N668 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC16.27■□□□□ 0.2
COMMD1Q8N668 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COMMD1Q8N668 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC16.27■□□□□ 0.2
COMMD1Q8N668 PFKL-212ENST00000628044 129 ntTSL 3 BASIC16.27■□□□□ 0.2
COMMD1Q8N668 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
COMMD1Q8N668 POLI-202ENST00000406285 2030 ntTSL 2 BASIC16.27■□□□□ 0.2
COMMD1Q8N668 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
COMMD1Q8N668 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
COMMD1Q8N668 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
COMMD1Q8N668 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
COMMD1Q8N668 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
COMMD1Q8N668 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
COMMD1Q8N668 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COMMD1Q8N668 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COMMD1Q8N668 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC16.26■□□□□ 0.19
COMMD1Q8N668 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC16.26■□□□□ 0.19
COMMD1Q8N668 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COMMD1Q8N668 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
COMMD1Q8N668 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC16.26■□□□□ 0.19
COMMD1Q8N668 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COMMD1Q8N668 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.26■□□□□ 0.19
COMMD1Q8N668 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COMMD1Q8N668 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
COMMD1Q8N668 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC16.26■□□□□ 0.19
COMMD1Q8N668 EMC9-206ENST00000560403 872 ntTSL 2 BASIC16.26■□□□□ 0.19
COMMD1Q8N668 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COMMD1Q8N668 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
COMMD1Q8N668 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC16.26■□□□□ 0.19
COMMD1Q8N668 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COMMD1Q8N668 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COMMD1Q8N668 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
COMMD1Q8N668 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC16.26■□□□□ 0.19
COMMD1Q8N668 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COMMD1Q8N668 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC16.26■□□□□ 0.19
COMMD1Q8N668 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms