Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
VPS8Q8N3P4 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC30.88■■■□□ 2.53
VPS8Q8N3P4 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC30.88■■■□□ 2.53
VPS8Q8N3P4 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC30.88■■■□□ 2.53
VPS8Q8N3P4 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
VPS8Q8N3P4 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC30.88■■■□□ 2.53
VPS8Q8N3P4 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
VPS8Q8N3P4 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
VPS8Q8N3P4 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC30.87■■■□□ 2.53
VPS8Q8N3P4 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC30.87■■■□□ 2.53
VPS8Q8N3P4 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC30.87■■■□□ 2.53
VPS8Q8N3P4 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
VPS8Q8N3P4 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC30.87■■■□□ 2.53
VPS8Q8N3P4 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC30.87■■■□□ 2.53
VPS8Q8N3P4 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
VPS8Q8N3P4 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
VPS8Q8N3P4 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC30.87■■■□□ 2.53
VPS8Q8N3P4 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
VPS8Q8N3P4 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
VPS8Q8N3P4 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
VPS8Q8N3P4 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC30.86■■■□□ 2.53
VPS8Q8N3P4 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
VPS8Q8N3P4 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC30.86■■■□□ 2.53
VPS8Q8N3P4 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC30.86■■■□□ 2.53
VPS8Q8N3P4 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC30.86■■■□□ 2.53
VPS8Q8N3P4 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC30.86■■■□□ 2.53
VPS8Q8N3P4 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC30.86■■■□□ 2.53
VPS8Q8N3P4 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC30.86■■■□□ 2.53
VPS8Q8N3P4 AC004980.1-204ENST00000429707 299 ntBASIC30.86■■■□□ 2.53
VPS8Q8N3P4 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC30.86■■■□□ 2.53
VPS8Q8N3P4 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC30.86■■■□□ 2.53
VPS8Q8N3P4 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC30.86■■■□□ 2.53
VPS8Q8N3P4 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC30.86■■■□□ 2.53
VPS8Q8N3P4 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
VPS8Q8N3P4 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
VPS8Q8N3P4 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC30.86■■■□□ 2.53
VPS8Q8N3P4 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
VPS8Q8N3P4 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC30.85■■■□□ 2.53
VPS8Q8N3P4 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
VPS8Q8N3P4 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
VPS8Q8N3P4 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
VPS8Q8N3P4 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
VPS8Q8N3P4 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC30.85■■■□□ 2.53
VPS8Q8N3P4 MESTP1-201ENST00000404287 994 ntBASIC30.85■■■□□ 2.53
VPS8Q8N3P4 NME1-207ENST00000480143 964 ntTSL 2 BASIC30.85■■■□□ 2.53
VPS8Q8N3P4 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC30.85■■■□□ 2.53
VPS8Q8N3P4 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC30.85■■■□□ 2.53
VPS8Q8N3P4 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC30.85■■■□□ 2.53
VPS8Q8N3P4 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
VPS8Q8N3P4 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
VPS8Q8N3P4 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
VPS8Q8N3P4 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
VPS8Q8N3P4 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC30.85■■■□□ 2.53
VPS8Q8N3P4 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
VPS8Q8N3P4 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC30.84■■■□□ 2.53
VPS8Q8N3P4 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
VPS8Q8N3P4 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
VPS8Q8N3P4 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC30.84■■■□□ 2.53
VPS8Q8N3P4 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
VPS8Q8N3P4 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
VPS8Q8N3P4 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
VPS8Q8N3P4 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
VPS8Q8N3P4 PPP1R14BP5-201ENST00000440334 435 ntBASIC30.84■■■□□ 2.53
VPS8Q8N3P4 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC30.84■■■□□ 2.53
VPS8Q8N3P4 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC30.84■■■□□ 2.53
VPS8Q8N3P4 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC30.84■■■□□ 2.53
VPS8Q8N3P4 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
VPS8Q8N3P4 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
VPS8Q8N3P4 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
VPS8Q8N3P4 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
VPS8Q8N3P4 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
VPS8Q8N3P4 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
VPS8Q8N3P4 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC30.84■■■□□ 2.53
VPS8Q8N3P4 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
VPS8Q8N3P4 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC30.83■■■□□ 2.53
VPS8Q8N3P4 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC30.83■■■□□ 2.53
VPS8Q8N3P4 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
VPS8Q8N3P4 REXO1L10P-201ENST00000615707 1290 ntBASIC30.83■■■□□ 2.53
VPS8Q8N3P4 REXO1L12P-201ENST00000622156 912 ntBASIC30.83■■■□□ 2.53
VPS8Q8N3P4 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC30.83■■■□□ 2.53
VPS8Q8N3P4 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC30.83■■■□□ 2.53
VPS8Q8N3P4 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC30.83■■■□□ 2.53
VPS8Q8N3P4 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC30.83■■■□□ 2.53
VPS8Q8N3P4 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
VPS8Q8N3P4 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC30.83■■■□□ 2.53
VPS8Q8N3P4 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC30.83■■■□□ 2.53
VPS8Q8N3P4 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC30.83■■■□□ 2.53
VPS8Q8N3P4 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
VPS8Q8N3P4 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
VPS8Q8N3P4 TSPY15P-201ENST00000457163 923 ntBASIC30.82■■■□□ 2.52
VPS8Q8N3P4 AP003071.4-201ENST00000562276 1284 ntBASIC30.82■■■□□ 2.52
VPS8Q8N3P4 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC30.82■■■□□ 2.52
VPS8Q8N3P4 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC30.82■■■□□ 2.52
VPS8Q8N3P4 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC30.82■■■□□ 2.52
VPS8Q8N3P4 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC30.82■■■□□ 2.52
VPS8Q8N3P4 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
VPS8Q8N3P4 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC30.82■■■□□ 2.52
VPS8Q8N3P4 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC30.81■■■□□ 2.52
VPS8Q8N3P4 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
VPS8Q8N3P4 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms