Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC20.41■□□□□ 0.86
NPAS3Q8IXF0 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
NPAS3Q8IXF0 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.41■□□□□ 0.86
NPAS3Q8IXF0 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.41■□□□□ 0.86
NPAS3Q8IXF0 SLC25A1P4-201ENST00000567977 778 ntBASIC20.41■□□□□ 0.86
NPAS3Q8IXF0 AC087388.1-201ENST00000571370 1112 ntBASIC20.41■□□□□ 0.86
NPAS3Q8IXF0 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
NPAS3Q8IXF0 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.41■□□□□ 0.86
NPAS3Q8IXF0 AP000692.2-201ENST00000608391 879 ntBASIC20.41■□□□□ 0.86
NPAS3Q8IXF0 AC130371.2-201ENST00000619443 611 ntBASIC20.41■□□□□ 0.86
NPAS3Q8IXF0 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
NPAS3Q8IXF0 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NPAS3Q8IXF0 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NPAS3Q8IXF0 RCC2P6-201ENST00000526625 1557 ntBASIC20.41■□□□□ 0.86
NPAS3Q8IXF0 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.41■□□□□ 0.86
NPAS3Q8IXF0 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.41■□□□□ 0.86
NPAS3Q8IXF0 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
NPAS3Q8IXF0 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
NPAS3Q8IXF0 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
NPAS3Q8IXF0 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NPAS3Q8IXF0 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
NPAS3Q8IXF0 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NPAS3Q8IXF0 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NPAS3Q8IXF0 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NPAS3Q8IXF0 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
NPAS3Q8IXF0 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
NPAS3Q8IXF0 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.4■□□□□ 0.86
NPAS3Q8IXF0 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
NPAS3Q8IXF0 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC20.4■□□□□ 0.86
NPAS3Q8IXF0 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NPAS3Q8IXF0 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.4■□□□□ 0.86
NPAS3Q8IXF0 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NPAS3Q8IXF0 AC128688.1-201ENST00000487626 519 ntBASIC20.4■□□□□ 0.86
NPAS3Q8IXF0 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.4■□□□□ 0.86
NPAS3Q8IXF0 LTBR-211ENST00000543190 785 ntTSL 3 BASIC20.4■□□□□ 0.86
NPAS3Q8IXF0 HLA-A-209ENST00000638375 975 ntBASIC20.4■□□□□ 0.86
NPAS3Q8IXF0 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
NPAS3Q8IXF0 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.39■□□□□ 0.86
NPAS3Q8IXF0 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
NPAS3Q8IXF0 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.39■□□□□ 0.86
NPAS3Q8IXF0 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.39■□□□□ 0.86
NPAS3Q8IXF0 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
NPAS3Q8IXF0 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
NPAS3Q8IXF0 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NPAS3Q8IXF0 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
NPAS3Q8IXF0 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
NPAS3Q8IXF0 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NPAS3Q8IXF0 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.39■□□□□ 0.85
NPAS3Q8IXF0 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
NPAS3Q8IXF0 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC20.39■□□□□ 0.85
NPAS3Q8IXF0 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NPAS3Q8IXF0 AC011298.2-201ENST00000617989 482 ntBASIC20.39■□□□□ 0.85
NPAS3Q8IXF0 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NPAS3Q8IXF0 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NPAS3Q8IXF0 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NPAS3Q8IXF0 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NPAS3Q8IXF0 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NPAS3Q8IXF0 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
NPAS3Q8IXF0 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NPAS3Q8IXF0 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NPAS3Q8IXF0 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
NPAS3Q8IXF0 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.38■□□□□ 0.85
NPAS3Q8IXF0 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
NPAS3Q8IXF0 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NPAS3Q8IXF0 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NPAS3Q8IXF0 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
NPAS3Q8IXF0 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NPAS3Q8IXF0 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NPAS3Q8IXF0 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NPAS3Q8IXF0 AC008040.2-201ENST00000461049 708 ntBASIC20.38■□□□□ 0.85
NPAS3Q8IXF0 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
NPAS3Q8IXF0 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NPAS3Q8IXF0 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
NPAS3Q8IXF0 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
NPAS3Q8IXF0 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NPAS3Q8IXF0 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NPAS3Q8IXF0 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NPAS3Q8IXF0 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.37■□□□□ 0.85
NPAS3Q8IXF0 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
NPAS3Q8IXF0 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NPAS3Q8IXF0 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NPAS3Q8IXF0 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NPAS3Q8IXF0 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC20.37■□□□□ 0.85
NPAS3Q8IXF0 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.37■□□□□ 0.85
NPAS3Q8IXF0 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC20.37■□□□□ 0.85
NPAS3Q8IXF0 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.37■□□□□ 0.85
NPAS3Q8IXF0 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC20.37■□□□□ 0.85
NPAS3Q8IXF0 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NPAS3Q8IXF0 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NPAS3Q8IXF0 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NPAS3Q8IXF0 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.37■□□□□ 0.85
NPAS3Q8IXF0 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NPAS3Q8IXF0 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NPAS3Q8IXF0 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.37■□□□□ 0.85
NPAS3Q8IXF0 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
NPAS3Q8IXF0 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NPAS3Q8IXF0 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
NPAS3Q8IXF0 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC20.36■□□□□ 0.85
NPAS3Q8IXF0 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.36■□□□□ 0.85
NPAS3Q8IXF0 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms