Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
RAB43Q86YS6 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RAB43Q86YS6 AC087289.5-201ENST00000586076 3175 ntBASIC18.76■□□□□ 0.59
RAB43Q86YS6 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.76■□□□□ 0.59
RAB43Q86YS6 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.76■□□□□ 0.59
RAB43Q86YS6 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB43Q86YS6 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.76■□□□□ 0.59
RAB43Q86YS6 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB43Q86YS6 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB43Q86YS6 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB43Q86YS6 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
RAB43Q86YS6 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB43Q86YS6 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.75■□□□□ 0.59
RAB43Q86YS6 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB43Q86YS6 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RAB43Q86YS6 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RAB43Q86YS6 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB43Q86YS6 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.75■□□□□ 0.59
RAB43Q86YS6 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB43Q86YS6 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB43Q86YS6 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.75■□□□□ 0.59
RAB43Q86YS6 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB43Q86YS6 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.75■□□□□ 0.59
RAB43Q86YS6 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RAB43Q86YS6 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.75■□□□□ 0.59
RAB43Q86YS6 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.75■□□□□ 0.59
RAB43Q86YS6 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
RAB43Q86YS6 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
RAB43Q86YS6 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.75■□□□□ 0.59
RAB43Q86YS6 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.75■□□□□ 0.59
RAB43Q86YS6 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB43Q86YS6 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB43Q86YS6 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB43Q86YS6 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
RAB43Q86YS6 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RAB43Q86YS6 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB43Q86YS6 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.74■□□□□ 0.59
RAB43Q86YS6 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB43Q86YS6 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB43Q86YS6 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RAB43Q86YS6 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB43Q86YS6 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RAB43Q86YS6 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.74■□□□□ 0.59
RAB43Q86YS6 TSPY7P-201ENST00000431358 1114 ntBASIC18.74■□□□□ 0.59
RAB43Q86YS6 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.74■□□□□ 0.59
RAB43Q86YS6 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB43Q86YS6 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.74■□□□□ 0.59
RAB43Q86YS6 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.74■□□□□ 0.59
RAB43Q86YS6 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB43Q86YS6 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.74■□□□□ 0.59
RAB43Q86YS6 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB43Q86YS6 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.74■□□□□ 0.59
RAB43Q86YS6 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.74■□□□□ 0.59
RAB43Q86YS6 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RAB43Q86YS6 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.74■□□□□ 0.59
RAB43Q86YS6 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB43Q86YS6 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB43Q86YS6 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RAB43Q86YS6 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB43Q86YS6 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.74■□□□□ 0.59
RAB43Q86YS6 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB43Q86YS6 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB43Q86YS6 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RAB43Q86YS6 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RAB43Q86YS6 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RAB43Q86YS6 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.73■□□□□ 0.59
RAB43Q86YS6 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.73■□□□□ 0.59
RAB43Q86YS6 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.73■□□□□ 0.59
RAB43Q86YS6 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB43Q86YS6 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RAB43Q86YS6 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RAB43Q86YS6 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB43Q86YS6 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.73■□□□□ 0.59
RAB43Q86YS6 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB43Q86YS6 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB43Q86YS6 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB43Q86YS6 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RAB43Q86YS6 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.73■□□□□ 0.59
RAB43Q86YS6 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.73■□□□□ 0.59
RAB43Q86YS6 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.73■□□□□ 0.59
RAB43Q86YS6 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RAB43Q86YS6 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.73■□□□□ 0.59
RAB43Q86YS6 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.73■□□□□ 0.59
RAB43Q86YS6 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.73■□□□□ 0.59
RAB43Q86YS6 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB43Q86YS6 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RAB43Q86YS6 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB43Q86YS6 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB43Q86YS6 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.73■□□□□ 0.59
RAB43Q86YS6 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.73■□□□□ 0.59
RAB43Q86YS6 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
RAB43Q86YS6 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB43Q86YS6 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB43Q86YS6 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RAB43Q86YS6 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB43Q86YS6 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
RAB43Q86YS6 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
RAB43Q86YS6 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB43Q86YS6 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
RAB43Q86YS6 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms