Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
ZNF546Q86UE3 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
ZNF546Q86UE3 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
ZNF546Q86UE3 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ZNF546Q86UE3 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
ZNF546Q86UE3 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ZNF546Q86UE3 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC16.34■□□□□ 0.21
ZNF546Q86UE3 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.34■□□□□ 0.21
ZNF546Q86UE3 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ZNF546Q86UE3 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC16.34■□□□□ 0.21
ZNF546Q86UE3 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
ZNF546Q86UE3 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.33■□□□□ 0.21
ZNF546Q86UE3 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
ZNF546Q86UE3 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ZNF546Q86UE3 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
ZNF546Q86UE3 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ZNF546Q86UE3 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ZNF546Q86UE3 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ZNF546Q86UE3 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC16.33■□□□□ 0.21
ZNF546Q86UE3 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF546Q86UE3 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.33■□□□□ 0.2
ZNF546Q86UE3 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.33■□□□□ 0.2
ZNF546Q86UE3 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF546Q86UE3 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
ZNF546Q86UE3 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF546Q86UE3 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF546Q86UE3 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC16.33■□□□□ 0.2
ZNF546Q86UE3 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF546Q86UE3 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF546Q86UE3 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF546Q86UE3 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
ZNF546Q86UE3 RNF146-206ENST00000480444 843 ntTSL 2 BASIC16.33■□□□□ 0.2
ZNF546Q86UE3 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC16.33■□□□□ 0.2
ZNF546Q86UE3 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC16.33■□□□□ 0.2
ZNF546Q86UE3 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF546Q86UE3 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF546Q86UE3 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF546Q86UE3 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF546Q86UE3 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
ZNF546Q86UE3 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
ZNF546Q86UE3 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
ZNF546Q86UE3 PXK-203ENST00000383715 1756 ntTSL 5 BASIC16.33■□□□□ 0.2
ZNF546Q86UE3 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF546Q86UE3 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF546Q86UE3 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF546Q86UE3 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
ZNF546Q86UE3 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF546Q86UE3 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF546Q86UE3 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF546Q86UE3 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF546Q86UE3 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC16.33■□□□□ 0.2
ZNF546Q86UE3 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF546Q86UE3 AC068880.1-201ENST00000507289 2297 ntBASIC16.33■□□□□ 0.2
ZNF546Q86UE3 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF546Q86UE3 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF546Q86UE3 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF546Q86UE3 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF546Q86UE3 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
ZNF546Q86UE3 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF546Q86UE3 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF546Q86UE3 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
ZNF546Q86UE3 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF546Q86UE3 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF546Q86UE3 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF546Q86UE3 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
ZNF546Q86UE3 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
ZNF546Q86UE3 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
ZNF546Q86UE3 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC16.32■□□□□ 0.2
ZNF546Q86UE3 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC16.32■□□□□ 0.2
ZNF546Q86UE3 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
ZNF546Q86UE3 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF546Q86UE3 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
ZNF546Q86UE3 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
ZNF546Q86UE3 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
ZNF546Q86UE3 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF546Q86UE3 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF546Q86UE3 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
ZNF546Q86UE3 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF546Q86UE3 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC16.31■□□□□ 0.2
ZNF546Q86UE3 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF546Q86UE3 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.31■□□□□ 0.2
ZNF546Q86UE3 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF546Q86UE3 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF546Q86UE3 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF546Q86UE3 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF546Q86UE3 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.31■□□□□ 0.2
ZNF546Q86UE3 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC16.31■□□□□ 0.2
ZNF546Q86UE3 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC16.31■□□□□ 0.2
ZNF546Q86UE3 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC16.31■□□□□ 0.2
ZNF546Q86UE3 GRAMD4P7-201ENST00000578182 1232 ntBASIC16.31■□□□□ 0.2
ZNF546Q86UE3 AL512631.2-201ENST00000604634 923 ntBASIC16.31■□□□□ 0.2
ZNF546Q86UE3 SF1-220ENST00000626028 704 ntTSL 2 BASIC16.31■□□□□ 0.2
ZNF546Q86UE3 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
ZNF546Q86UE3 MOK-225ENST00000522867 1883 ntTSL 5 BASIC16.31■□□□□ 0.2
ZNF546Q86UE3 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.31■□□□□ 0.2
ZNF546Q86UE3 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
ZNF546Q86UE3 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.3■□□□□ 0.2
ZNF546Q86UE3 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.3■□□□□ 0.2
ZNF546Q86UE3 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
ZNF546Q86UE3 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms