Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAI1Q7Z5J4 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAI1Q7Z5J4 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.84■□□□□ 0.29
RAI1Q7Z5J4 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.84■□□□□ 0.29
RAI1Q7Z5J4 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RAI1Q7Z5J4 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RAI1Q7Z5J4 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.84■□□□□ 0.29
RAI1Q7Z5J4 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
RAI1Q7Z5J4 AL512408.1-201ENST00000569378 2000 ntBASIC16.84■□□□□ 0.29
RAI1Q7Z5J4 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
RAI1Q7Z5J4 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
RAI1Q7Z5J4 FSCN1P1-201ENST00000568912 1481 ntBASIC16.83■□□□□ 0.29
RAI1Q7Z5J4 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAI1Q7Z5J4 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAI1Q7Z5J4 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAI1Q7Z5J4 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
RAI1Q7Z5J4 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
RAI1Q7Z5J4 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC16.83■□□□□ 0.28
RAI1Q7Z5J4 AC011506.1-201ENST00000474329 610 ntBASIC16.83■□□□□ 0.28
RAI1Q7Z5J4 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
RAI1Q7Z5J4 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAI1Q7Z5J4 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RAI1Q7Z5J4 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RAI1Q7Z5J4 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC16.83■□□□□ 0.28
RAI1Q7Z5J4 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAI1Q7Z5J4 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RAI1Q7Z5J4 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAI1Q7Z5J4 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC16.82■□□□□ 0.28
RAI1Q7Z5J4 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.82■□□□□ 0.28
RAI1Q7Z5J4 DET1-207ENST00000564406 2315 ntTSL 2 BASIC16.82■□□□□ 0.28
RAI1Q7Z5J4 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RAI1Q7Z5J4 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAI1Q7Z5J4 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RAI1Q7Z5J4 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.82■□□□□ 0.28
RAI1Q7Z5J4 DUX4L26-201ENST00000489078 1255 ntBASIC16.82■□□□□ 0.28
RAI1Q7Z5J4 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAI1Q7Z5J4 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC16.82■□□□□ 0.28
RAI1Q7Z5J4 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC16.82■□□□□ 0.28
RAI1Q7Z5J4 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
RAI1Q7Z5J4 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC16.82■□□□□ 0.28
RAI1Q7Z5J4 AC116351.2-201ENST00000606540 1585 ntBASIC16.82■□□□□ 0.28
RAI1Q7Z5J4 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAI1Q7Z5J4 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAI1Q7Z5J4 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC16.82■□□□□ 0.28
RAI1Q7Z5J4 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAI1Q7Z5J4 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAI1Q7Z5J4 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAI1Q7Z5J4 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAI1Q7Z5J4 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAI1Q7Z5J4 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.82■□□□□ 0.28
RAI1Q7Z5J4 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RAI1Q7Z5J4 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RAI1Q7Z5J4 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
RAI1Q7Z5J4 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAI1Q7Z5J4 AC018553.1-201ENST00000616682 1458 ntBASIC16.82■□□□□ 0.28
RAI1Q7Z5J4 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC16.81■□□□□ 0.28
RAI1Q7Z5J4 TFP1-202ENST00000475455 1573 ntBASIC16.81■□□□□ 0.28
RAI1Q7Z5J4 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAI1Q7Z5J4 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAI1Q7Z5J4 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
RAI1Q7Z5J4 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.81■□□□□ 0.28
RAI1Q7Z5J4 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC16.81■□□□□ 0.28
RAI1Q7Z5J4 AC020907.5-201ENST00000624372 1936 ntBASIC16.81■□□□□ 0.28
RAI1Q7Z5J4 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.81■□□□□ 0.28
RAI1Q7Z5J4 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.81■□□□□ 0.28
RAI1Q7Z5J4 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RAI1Q7Z5J4 GOLGA6L3-201ENST00000507199 1679 ntBASIC16.81■□□□□ 0.28
RAI1Q7Z5J4 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAI1Q7Z5J4 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAI1Q7Z5J4 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RAI1Q7Z5J4 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RAI1Q7Z5J4 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC16.81■□□□□ 0.28
RAI1Q7Z5J4 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
RAI1Q7Z5J4 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RAI1Q7Z5J4 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RAI1Q7Z5J4 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAI1Q7Z5J4 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
RAI1Q7Z5J4 KRT18P16-201ENST00000510337 1294 ntBASIC16.8■□□□□ 0.28
RAI1Q7Z5J4 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.8■□□□□ 0.28
RAI1Q7Z5J4 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.8■□□□□ 0.28
RAI1Q7Z5J4 AP005242.2-201ENST00000580065 1175 ntBASIC16.8■□□□□ 0.28
RAI1Q7Z5J4 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
RAI1Q7Z5J4 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC16.8■□□□□ 0.28
RAI1Q7Z5J4 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAI1Q7Z5J4 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC16.8■□□□□ 0.28
RAI1Q7Z5J4 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAI1Q7Z5J4 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAI1Q7Z5J4 AP006587.1-201ENST00000534129 1502 ntBASIC16.8■□□□□ 0.28
RAI1Q7Z5J4 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC16.8■□□□□ 0.28
RAI1Q7Z5J4 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAI1Q7Z5J4 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
RAI1Q7Z5J4 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.8■□□□□ 0.28
RAI1Q7Z5J4 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RAI1Q7Z5J4 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.8■□□□□ 0.28
RAI1Q7Z5J4 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RAI1Q7Z5J4 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.8■□□□□ 0.28
RAI1Q7Z5J4 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAI1Q7Z5J4 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
RAI1Q7Z5J4 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.8■□□□□ 0.28
RAI1Q7Z5J4 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms