Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
ZNF550Q7Z398 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.1■□□□□ 0.49
ZNF550Q7Z398 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF550Q7Z398 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF550Q7Z398 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF550Q7Z398 TREX1-205ENST00000625293 1783 ntBASIC18.1■□□□□ 0.49
ZNF550Q7Z398 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF550Q7Z398 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF550Q7Z398 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF550Q7Z398 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.1■□□□□ 0.49
ZNF550Q7Z398 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF550Q7Z398 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.1■□□□□ 0.49
ZNF550Q7Z398 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.1■□□□□ 0.49
ZNF550Q7Z398 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.1■□□□□ 0.49
ZNF550Q7Z398 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF550Q7Z398 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF550Q7Z398 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
ZNF550Q7Z398 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF550Q7Z398 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.1■□□□□ 0.49
ZNF550Q7Z398 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.1■□□□□ 0.49
ZNF550Q7Z398 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.1■□□□□ 0.49
ZNF550Q7Z398 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
ZNF550Q7Z398 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
ZNF550Q7Z398 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF550Q7Z398 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.09■□□□□ 0.49
ZNF550Q7Z398 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF550Q7Z398 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.09■□□□□ 0.49
ZNF550Q7Z398 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.09■□□□□ 0.49
ZNF550Q7Z398 KRT18P29-201ENST00000397031 1267 ntBASIC18.09■□□□□ 0.49
ZNF550Q7Z398 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.09■□□□□ 0.49
ZNF550Q7Z398 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.09■□□□□ 0.49
ZNF550Q7Z398 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
ZNF550Q7Z398 AC066615.1-201ENST00000640911 628 ntBASIC18.09■□□□□ 0.49
ZNF550Q7Z398 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.09■□□□□ 0.49
ZNF550Q7Z398 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF550Q7Z398 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF550Q7Z398 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF550Q7Z398 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF550Q7Z398 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
ZNF550Q7Z398 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.09■□□□□ 0.49
ZNF550Q7Z398 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.09■□□□□ 0.49
ZNF550Q7Z398 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.09■□□□□ 0.49
ZNF550Q7Z398 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF550Q7Z398 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF550Q7Z398 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.09■□□□□ 0.49
ZNF550Q7Z398 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.09■□□□□ 0.49
ZNF550Q7Z398 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF550Q7Z398 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF550Q7Z398 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.08■□□□□ 0.49
ZNF550Q7Z398 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.08■□□□□ 0.49
ZNF550Q7Z398 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.08■□□□□ 0.49
ZNF550Q7Z398 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ZNF550Q7Z398 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZNF550Q7Z398 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.08■□□□□ 0.48
ZNF550Q7Z398 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZNF550Q7Z398 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.08■□□□□ 0.48
ZNF550Q7Z398 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZNF550Q7Z398 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.08■□□□□ 0.48
ZNF550Q7Z398 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.48
ZNF550Q7Z398 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
ZNF550Q7Z398 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ZNF550Q7Z398 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.08■□□□□ 0.48
ZNF550Q7Z398 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.08■□□□□ 0.48
ZNF550Q7Z398 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZNF550Q7Z398 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZNF550Q7Z398 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZNF550Q7Z398 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.08■□□□□ 0.48
ZNF550Q7Z398 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZNF550Q7Z398 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
ZNF550Q7Z398 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZNF550Q7Z398 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF550Q7Z398 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF550Q7Z398 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF550Q7Z398 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF550Q7Z398 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.07■□□□□ 0.48
ZNF550Q7Z398 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.07■□□□□ 0.48
ZNF550Q7Z398 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF550Q7Z398 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF550Q7Z398 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF550Q7Z398 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF550Q7Z398 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.07■□□□□ 0.48
ZNF550Q7Z398 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF550Q7Z398 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF550Q7Z398 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
ZNF550Q7Z398 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF550Q7Z398 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.07■□□□□ 0.48
ZNF550Q7Z398 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.07■□□□□ 0.48
ZNF550Q7Z398 AC008687.6-201ENST00000596318 630 ntBASIC18.07■□□□□ 0.48
ZNF550Q7Z398 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF550Q7Z398 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.07■□□□□ 0.48
ZNF550Q7Z398 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF550Q7Z398 AC116351.2-201ENST00000606540 1585 ntBASIC18.07■□□□□ 0.48
ZNF550Q7Z398 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF550Q7Z398 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF550Q7Z398 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF550Q7Z398 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF550Q7Z398 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
ZNF550Q7Z398 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF550Q7Z398 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
ZNF550Q7Z398 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms