Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
SCXQ7RTU7 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SCXQ7RTU7 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC12.96□□□□□ -0.33
SCXQ7RTU7 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
SCXQ7RTU7 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SCXQ7RTU7 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SCXQ7RTU7 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
SCXQ7RTU7 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC12.96□□□□□ -0.33
SCXQ7RTU7 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SCXQ7RTU7 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SCXQ7RTU7 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
SCXQ7RTU7 HTR7P1-202ENST00000624664 4411 ntBASIC12.96□□□□□ -0.33
SCXQ7RTU7 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
SCXQ7RTU7 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SCXQ7RTU7 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
SCXQ7RTU7 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SCXQ7RTU7 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
SCXQ7RTU7 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
SCXQ7RTU7 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
SCXQ7RTU7 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SCXQ7RTU7 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC12.96□□□□□ -0.33
SCXQ7RTU7 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC12.96□□□□□ -0.33
SCXQ7RTU7 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SCXQ7RTU7 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SCXQ7RTU7 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC12.96□□□□□ -0.33
SCXQ7RTU7 USP36-216ENST00000589424 970 ntTSL 5 BASIC12.96□□□□□ -0.33
SCXQ7RTU7 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC12.96□□□□□ -0.33
SCXQ7RTU7 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
SCXQ7RTU7 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SCXQ7RTU7 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
SCXQ7RTU7 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
SCXQ7RTU7 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
SCXQ7RTU7 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC12.96□□□□□ -0.33
SCXQ7RTU7 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC12.96□□□□□ -0.33
SCXQ7RTU7 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
SCXQ7RTU7 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
SCXQ7RTU7 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SCXQ7RTU7 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
SCXQ7RTU7 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC12.96□□□□□ -0.34
SCXQ7RTU7 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC12.96□□□□□ -0.34
SCXQ7RTU7 AC120498.9-201ENST00000339021 3867 ntBASIC12.96□□□□□ -0.34
SCXQ7RTU7 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SCXQ7RTU7 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
SCXQ7RTU7 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC12.96□□□□□ -0.34
SCXQ7RTU7 AC087633.2-202ENST00000565166 1439 ntBASIC12.96□□□□□ -0.34
SCXQ7RTU7 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC12.96□□□□□ -0.34
SCXQ7RTU7 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC12.96□□□□□ -0.34
SCXQ7RTU7 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC12.95□□□□□ -0.34
SCXQ7RTU7 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SCXQ7RTU7 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SCXQ7RTU7 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SCXQ7RTU7 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
SCXQ7RTU7 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
SCXQ7RTU7 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC12.95□□□□□ -0.34
SCXQ7RTU7 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SCXQ7RTU7 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC12.95□□□□□ -0.34
SCXQ7RTU7 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
SCXQ7RTU7 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC12.95□□□□□ -0.34
SCXQ7RTU7 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC12.95□□□□□ -0.34
SCXQ7RTU7 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
SCXQ7RTU7 PGM5P4-201ENST00000421970 445 ntBASIC12.95□□□□□ -0.34
SCXQ7RTU7 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
SCXQ7RTU7 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC12.95□□□□□ -0.34
SCXQ7RTU7 SLC29A4P2-201ENST00000504749 1089 ntBASIC12.95□□□□□ -0.34
SCXQ7RTU7 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC12.95□□□□□ -0.34
SCXQ7RTU7 C1QBPP2-201ENST00000528754 825 ntBASIC12.95□□□□□ -0.34
SCXQ7RTU7 RHOD-202ENST00000532559 538 ntTSL 3 BASIC12.95□□□□□ -0.34
SCXQ7RTU7 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC12.95□□□□□ -0.34
SCXQ7RTU7 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SCXQ7RTU7 AL359736.2-201ENST00000621992 437 ntBASIC12.95□□□□□ -0.34
SCXQ7RTU7 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SCXQ7RTU7 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SCXQ7RTU7 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SCXQ7RTU7 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC12.95□□□□□ -0.34
SCXQ7RTU7 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SCXQ7RTU7 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SCXQ7RTU7 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SCXQ7RTU7 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SCXQ7RTU7 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SCXQ7RTU7 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
SCXQ7RTU7 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SCXQ7RTU7 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SCXQ7RTU7 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC12.94□□□□□ -0.34
SCXQ7RTU7 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SCXQ7RTU7 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SCXQ7RTU7 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SCXQ7RTU7 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SCXQ7RTU7 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SCXQ7RTU7 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SCXQ7RTU7 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SCXQ7RTU7 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC12.94□□□□□ -0.34
SCXQ7RTU7 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SCXQ7RTU7 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
SCXQ7RTU7 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SCXQ7RTU7 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC12.94□□□□□ -0.34
SCXQ7RTU7 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC12.94□□□□□ -0.34
SCXQ7RTU7 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC12.94□□□□□ -0.34
SCXQ7RTU7 UBE2SP1-201ENST00000450587 669 ntBASIC12.94□□□□□ -0.34
SCXQ7RTU7 AC008550.1-201ENST00000511500 884 ntBASIC12.94□□□□□ -0.34
SCXQ7RTU7 RNF121-214ENST00000533380 870 ntTSL 3 BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms