Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC23.34■■□□□ 1.33
USP50Q70EL3 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
USP50Q70EL3 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
USP50Q70EL3 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
USP50Q70EL3 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
USP50Q70EL3 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC23.34■■□□□ 1.33
USP50Q70EL3 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC23.34■■□□□ 1.33
USP50Q70EL3 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC23.34■■□□□ 1.33
USP50Q70EL3 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC23.34■■□□□ 1.33
USP50Q70EL3 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC23.34■■□□□ 1.33
USP50Q70EL3 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
USP50Q70EL3 AC244015.2-201ENST00000616358 1861 ntBASIC23.34■■□□□ 1.33
USP50Q70EL3 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
USP50Q70EL3 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
USP50Q70EL3 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC23.33■■□□□ 1.33
USP50Q70EL3 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
USP50Q70EL3 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
USP50Q70EL3 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
USP50Q70EL3 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
USP50Q70EL3 STARP1-201ENST00000397973 869 ntBASIC23.33■■□□□ 1.33
USP50Q70EL3 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC23.33■■□□□ 1.33
USP50Q70EL3 RN7SL510P-201ENST00000581311 263 ntBASIC23.33■■□□□ 1.33
USP50Q70EL3 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC23.33■■□□□ 1.32
USP50Q70EL3 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
USP50Q70EL3 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC23.32■■□□□ 1.32
USP50Q70EL3 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
USP50Q70EL3 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
USP50Q70EL3 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
USP50Q70EL3 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC23.32■■□□□ 1.32
USP50Q70EL3 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC23.32■■□□□ 1.32
USP50Q70EL3 SDHD-206ENST00000528182 754 ntTSL 3 BASIC23.32■■□□□ 1.32
USP50Q70EL3 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC23.32■■□□□ 1.32
USP50Q70EL3 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC23.32■■□□□ 1.32
USP50Q70EL3 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
USP50Q70EL3 NPAP1P7-201ENST00000613027 823 ntBASIC23.32■■□□□ 1.32
USP50Q70EL3 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
USP50Q70EL3 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC23.32■■□□□ 1.32
USP50Q70EL3 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC23.32■■□□□ 1.32
USP50Q70EL3 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC23.32■■□□□ 1.32
USP50Q70EL3 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
USP50Q70EL3 KRT8P45-201ENST00000414328 1447 ntBASIC23.32■■□□□ 1.32
USP50Q70EL3 LINC01311-201ENST00000565162 1445 ntBASIC23.32■■□□□ 1.32
USP50Q70EL3 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC23.32■■□□□ 1.32
USP50Q70EL3 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
USP50Q70EL3 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
USP50Q70EL3 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
USP50Q70EL3 AC005229.4-201ENST00000610085 2198 ntBASIC23.31■■□□□ 1.32
USP50Q70EL3 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
USP50Q70EL3 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC23.31■■□□□ 1.32
USP50Q70EL3 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
USP50Q70EL3 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
USP50Q70EL3 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
USP50Q70EL3 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
USP50Q70EL3 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
USP50Q70EL3 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
USP50Q70EL3 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
USP50Q70EL3 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC23.31■■□□□ 1.32
USP50Q70EL3 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC23.31■■□□□ 1.32
USP50Q70EL3 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC23.31■■□□□ 1.32
USP50Q70EL3 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
USP50Q70EL3 PRR29-207ENST00000580752 458 ntTSL 3 BASIC23.31■■□□□ 1.32
USP50Q70EL3 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC23.31■■□□□ 1.32
USP50Q70EL3 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
USP50Q70EL3 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
USP50Q70EL3 AL049796.1-201ENST00000565336 1766 ntBASIC23.31■■□□□ 1.32
USP50Q70EL3 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
USP50Q70EL3 GUSBP5-202ENST00000510805 1989 ntBASIC23.31■■□□□ 1.32
USP50Q70EL3 PHGDH-210ENST00000641115 1638 ntBASIC23.3■■□□□ 1.32
USP50Q70EL3 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
USP50Q70EL3 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
USP50Q70EL3 Telomerase-vert.1-201ENST00000363312 438 ntBASIC23.3■■□□□ 1.32
USP50Q70EL3 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC23.3■■□□□ 1.32
USP50Q70EL3 PVRIG2P-201ENST00000435460 978 ntBASIC23.3■■□□□ 1.32
USP50Q70EL3 PHB2-202ENST00000440277 996 ntTSL 5 BASIC23.3■■□□□ 1.32
USP50Q70EL3 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC23.3■■□□□ 1.32
USP50Q70EL3 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC23.3■■□□□ 1.32
USP50Q70EL3 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC23.3■■□□□ 1.32
USP50Q70EL3 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
USP50Q70EL3 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
USP50Q70EL3 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
USP50Q70EL3 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC23.3■■□□□ 1.32
USP50Q70EL3 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
USP50Q70EL3 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
USP50Q70EL3 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
USP50Q70EL3 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC23.3■■□□□ 1.32
USP50Q70EL3 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
USP50Q70EL3 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC23.29■■□□□ 1.32
USP50Q70EL3 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
USP50Q70EL3 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC23.29■■□□□ 1.32
USP50Q70EL3 DPP3P2-201ENST00000416030 1696 ntBASIC23.29■■□□□ 1.32
USP50Q70EL3 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
USP50Q70EL3 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
USP50Q70EL3 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC23.29■■□□□ 1.32
USP50Q70EL3 CNP-204ENST00000472031 1019 ntTSL 2 BASIC23.29■■□□□ 1.32
USP50Q70EL3 MIR3652-201ENST00000579335 131 ntBASIC23.29■■□□□ 1.32
USP50Q70EL3 NEK4P2-201ENST00000580004 1012 ntBASIC23.29■■□□□ 1.32
USP50Q70EL3 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
USP50Q70EL3 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
USP50Q70EL3 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
USP50Q70EL3 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms