Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.66■□□□□ 0.42
NHLRC1Q6VVB1 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.66■□□□□ 0.42
NHLRC1Q6VVB1 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NHLRC1Q6VVB1 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.66■□□□□ 0.42
NHLRC1Q6VVB1 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.66■□□□□ 0.42
NHLRC1Q6VVB1 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NHLRC1Q6VVB1 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NHLRC1Q6VVB1 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
NHLRC1Q6VVB1 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NHLRC1Q6VVB1 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NHLRC1Q6VVB1 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.66■□□□□ 0.42
NHLRC1Q6VVB1 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NHLRC1Q6VVB1 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.66■□□□□ 0.42
NHLRC1Q6VVB1 AP001271.2-201ENST00000624018 1556 ntBASIC17.66■□□□□ 0.42
NHLRC1Q6VVB1 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NHLRC1Q6VVB1 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.65■□□□□ 0.42
NHLRC1Q6VVB1 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NHLRC1Q6VVB1 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.65■□□□□ 0.42
NHLRC1Q6VVB1 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NHLRC1Q6VVB1 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NHLRC1Q6VVB1 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NHLRC1Q6VVB1 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NHLRC1Q6VVB1 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NHLRC1Q6VVB1 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.65■□□□□ 0.42
NHLRC1Q6VVB1 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NHLRC1Q6VVB1 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.65■□□□□ 0.42
NHLRC1Q6VVB1 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.65■□□□□ 0.42
NHLRC1Q6VVB1 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.65■□□□□ 0.42
NHLRC1Q6VVB1 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NHLRC1Q6VVB1 AC006557.6-201ENST00000623071 864 ntBASIC17.65■□□□□ 0.42
NHLRC1Q6VVB1 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NHLRC1Q6VVB1 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.65■□□□□ 0.42
NHLRC1Q6VVB1 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NHLRC1Q6VVB1 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NHLRC1Q6VVB1 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.65■□□□□ 0.42
NHLRC1Q6VVB1 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.65■□□□□ 0.42
NHLRC1Q6VVB1 AC092368.3-202ENST00000574180 1591 ntBASIC17.65■□□□□ 0.42
NHLRC1Q6VVB1 AC116351.2-201ENST00000606540 1585 ntBASIC17.65■□□□□ 0.42
NHLRC1Q6VVB1 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
NHLRC1Q6VVB1 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.65■□□□□ 0.42
NHLRC1Q6VVB1 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
NHLRC1Q6VVB1 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
NHLRC1Q6VVB1 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NHLRC1Q6VVB1 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NHLRC1Q6VVB1 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
NHLRC1Q6VVB1 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.64■□□□□ 0.42
NHLRC1Q6VVB1 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
NHLRC1Q6VVB1 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
NHLRC1Q6VVB1 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.64■□□□□ 0.41
NHLRC1Q6VVB1 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NHLRC1Q6VVB1 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
NHLRC1Q6VVB1 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.64■□□□□ 0.41
NHLRC1Q6VVB1 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NHLRC1Q6VVB1 TREX1-205ENST00000625293 1783 ntBASIC17.64■□□□□ 0.41
NHLRC1Q6VVB1 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
NHLRC1Q6VVB1 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NHLRC1Q6VVB1 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.64■□□□□ 0.41
NHLRC1Q6VVB1 AL355802.2-201ENST00000402069 882 ntBASIC17.64■□□□□ 0.41
NHLRC1Q6VVB1 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.64■□□□□ 0.41
NHLRC1Q6VVB1 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.64■□□□□ 0.41
NHLRC1Q6VVB1 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.64■□□□□ 0.41
NHLRC1Q6VVB1 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NHLRC1Q6VVB1 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NHLRC1Q6VVB1 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.64■□□□□ 0.41
NHLRC1Q6VVB1 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NHLRC1Q6VVB1 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NHLRC1Q6VVB1 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.64■□□□□ 0.41
NHLRC1Q6VVB1 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NHLRC1Q6VVB1 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
NHLRC1Q6VVB1 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NHLRC1Q6VVB1 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NHLRC1Q6VVB1 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NHLRC1Q6VVB1 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.64■□□□□ 0.41
NHLRC1Q6VVB1 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NHLRC1Q6VVB1 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
NHLRC1Q6VVB1 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NHLRC1Q6VVB1 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.63■□□□□ 0.41
NHLRC1Q6VVB1 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
NHLRC1Q6VVB1 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NHLRC1Q6VVB1 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.63■□□□□ 0.41
NHLRC1Q6VVB1 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.63■□□□□ 0.41
NHLRC1Q6VVB1 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.63■□□□□ 0.41
NHLRC1Q6VVB1 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NHLRC1Q6VVB1 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NHLRC1Q6VVB1 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.63■□□□□ 0.41
NHLRC1Q6VVB1 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.63■□□□□ 0.41
NHLRC1Q6VVB1 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NHLRC1Q6VVB1 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NHLRC1Q6VVB1 AL390719.1-204ENST00000412397 1219 ntBASIC17.63■□□□□ 0.41
NHLRC1Q6VVB1 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.63■□□□□ 0.41
NHLRC1Q6VVB1 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NHLRC1Q6VVB1 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.63■□□□□ 0.41
NHLRC1Q6VVB1 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NHLRC1Q6VVB1 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.63■□□□□ 0.41
NHLRC1Q6VVB1 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NHLRC1Q6VVB1 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NHLRC1Q6VVB1 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NHLRC1Q6VVB1 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NHLRC1Q6VVB1 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NHLRC1Q6VVB1 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms