Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
DCLRE1AQ6PJP8 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
DCLRE1AQ6PJP8 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
DCLRE1AQ6PJP8 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC21.04■□□□□ 0.96
DCLRE1AQ6PJP8 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
DCLRE1AQ6PJP8 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
DCLRE1AQ6PJP8 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
DCLRE1AQ6PJP8 RCN1P1-201ENST00000400413 996 ntBASIC21.04■□□□□ 0.96
DCLRE1AQ6PJP8 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
DCLRE1AQ6PJP8 AC012306.2-201ENST00000609350 630 ntBASIC21.04■□□□□ 0.96
DCLRE1AQ6PJP8 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC21.04■□□□□ 0.96
DCLRE1AQ6PJP8 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
DCLRE1AQ6PJP8 AC079598.2-202ENST00000546624 1451 ntBASIC21.04■□□□□ 0.96
DCLRE1AQ6PJP8 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
DCLRE1AQ6PJP8 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
DCLRE1AQ6PJP8 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
DCLRE1AQ6PJP8 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
DCLRE1AQ6PJP8 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
DCLRE1AQ6PJP8 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
DCLRE1AQ6PJP8 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC21.04■□□□□ 0.96
DCLRE1AQ6PJP8 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
DCLRE1AQ6PJP8 AP005212.1-201ENST00000581547 1997 ntBASIC21.03■□□□□ 0.96
DCLRE1AQ6PJP8 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
DCLRE1AQ6PJP8 AP001271.2-201ENST00000624018 1556 ntBASIC21.03■□□□□ 0.96
DCLRE1AQ6PJP8 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
DCLRE1AQ6PJP8 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.03■□□□□ 0.96
DCLRE1AQ6PJP8 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
DCLRE1AQ6PJP8 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC21.03■□□□□ 0.96
DCLRE1AQ6PJP8 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
DCLRE1AQ6PJP8 TMEM179-206ENST00000616017 1645 ntBASIC21.03■□□□□ 0.96
DCLRE1AQ6PJP8 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
DCLRE1AQ6PJP8 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
DCLRE1AQ6PJP8 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
DCLRE1AQ6PJP8 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
DCLRE1AQ6PJP8 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
DCLRE1AQ6PJP8 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
DCLRE1AQ6PJP8 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.02■□□□□ 0.96
DCLRE1AQ6PJP8 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
DCLRE1AQ6PJP8 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
DCLRE1AQ6PJP8 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
DCLRE1AQ6PJP8 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.02■□□□□ 0.96
DCLRE1AQ6PJP8 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
DCLRE1AQ6PJP8 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
DCLRE1AQ6PJP8 PPOX-219ENST00000544598 813 ntTSL 2 BASIC21.02■□□□□ 0.96
DCLRE1AQ6PJP8 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
DCLRE1AQ6PJP8 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC21.02■□□□□ 0.96
DCLRE1AQ6PJP8 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC21.02■□□□□ 0.96
DCLRE1AQ6PJP8 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
DCLRE1AQ6PJP8 FEM1AP1-201ENST00000431297 1995 ntBASIC21.02■□□□□ 0.96
DCLRE1AQ6PJP8 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.02■□□□□ 0.96
DCLRE1AQ6PJP8 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
DCLRE1AQ6PJP8 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
DCLRE1AQ6PJP8 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC21.02■□□□□ 0.95
DCLRE1AQ6PJP8 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
DCLRE1AQ6PJP8 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.01■□□□□ 0.95
DCLRE1AQ6PJP8 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
DCLRE1AQ6PJP8 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
DCLRE1AQ6PJP8 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
DCLRE1AQ6PJP8 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
DCLRE1AQ6PJP8 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
DCLRE1AQ6PJP8 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
DCLRE1AQ6PJP8 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
DCLRE1AQ6PJP8 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
DCLRE1AQ6PJP8 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC21.01■□□□□ 0.95
DCLRE1AQ6PJP8 AC026271.3-201ENST00000571884 352 ntBASIC21.01■□□□□ 0.95
DCLRE1AQ6PJP8 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
DCLRE1AQ6PJP8 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC21.01■□□□□ 0.95
DCLRE1AQ6PJP8 AP000525.1-201ENST00000608286 694 ntBASIC21.01■□□□□ 0.95
DCLRE1AQ6PJP8 AC131212.4-201ENST00000623606 975 ntBASIC21.01■□□□□ 0.95
DCLRE1AQ6PJP8 GLDC-219ENST00000640208 420 ntTSL 2 BASIC21.01■□□□□ 0.95
DCLRE1AQ6PJP8 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
DCLRE1AQ6PJP8 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
DCLRE1AQ6PJP8 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
DCLRE1AQ6PJP8 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.01■□□□□ 0.95
DCLRE1AQ6PJP8 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
DCLRE1AQ6PJP8 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
DCLRE1AQ6PJP8 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
DCLRE1AQ6PJP8 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
DCLRE1AQ6PJP8 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
DCLRE1AQ6PJP8 MOK-225ENST00000522867 1883 ntTSL 5 BASIC21.01■□□□□ 0.95
DCLRE1AQ6PJP8 FSCN1P1-201ENST00000568912 1481 ntBASIC21.01■□□□□ 0.95
DCLRE1AQ6PJP8 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
DCLRE1AQ6PJP8 GOLGA2P11-201ENST00000562660 1621 ntBASIC21■□□□□ 0.95
DCLRE1AQ6PJP8 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
DCLRE1AQ6PJP8 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
DCLRE1AQ6PJP8 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
DCLRE1AQ6PJP8 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC21■□□□□ 0.95
DCLRE1AQ6PJP8 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC21■□□□□ 0.95
DCLRE1AQ6PJP8 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
DCLRE1AQ6PJP8 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
DCLRE1AQ6PJP8 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
DCLRE1AQ6PJP8 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC21■□□□□ 0.95
DCLRE1AQ6PJP8 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC21■□□□□ 0.95
DCLRE1AQ6PJP8 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC21■□□□□ 0.95
DCLRE1AQ6PJP8 ABBA01031674.1-201ENST00000635145 728 ntBASIC21■□□□□ 0.95
DCLRE1AQ6PJP8 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
DCLRE1AQ6PJP8 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
DCLRE1AQ6PJP8 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
DCLRE1AQ6PJP8 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
DCLRE1AQ6PJP8 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms