Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AC004980.1-204ENST00000429707 299 ntBASIC20.86■□□□□ 0.93
VARS2Q5ST30 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.86■□□□□ 0.93
VARS2Q5ST30 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.86■□□□□ 0.93
VARS2Q5ST30 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.86■□□□□ 0.93
VARS2Q5ST30 AL512408.1-201ENST00000569378 2000 ntBASIC20.86■□□□□ 0.93
VARS2Q5ST30 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.86■□□□□ 0.93
VARS2Q5ST30 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.86■□□□□ 0.93
VARS2Q5ST30 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VARS2Q5ST30 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
VARS2Q5ST30 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VARS2Q5ST30 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VARS2Q5ST30 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VARS2Q5ST30 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.85■□□□□ 0.93
VARS2Q5ST30 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
VARS2Q5ST30 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
VARS2Q5ST30 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.85■□□□□ 0.93
VARS2Q5ST30 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VARS2Q5ST30 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.85■□□□□ 0.93
VARS2Q5ST30 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VARS2Q5ST30 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.85■□□□□ 0.93
VARS2Q5ST30 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.85■□□□□ 0.93
VARS2Q5ST30 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VARS2Q5ST30 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VARS2Q5ST30 PPOX-219ENST00000544598 813 ntTSL 2 BASIC20.85■□□□□ 0.93
VARS2Q5ST30 FITM1-202ENST00000559294 800 ntBASIC20.85■□□□□ 0.93
VARS2Q5ST30 MIR6786-201ENST00000616843 113 ntBASIC20.85■□□□□ 0.93
VARS2Q5ST30 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.85■□□□□ 0.93
VARS2Q5ST30 FSCN1P1-201ENST00000568912 1481 ntBASIC20.85■□□□□ 0.93
VARS2Q5ST30 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VARS2Q5ST30 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VARS2Q5ST30 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VARS2Q5ST30 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VARS2Q5ST30 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VARS2Q5ST30 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
VARS2Q5ST30 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VARS2Q5ST30 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.84■□□□□ 0.93
VARS2Q5ST30 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
VARS2Q5ST30 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VARS2Q5ST30 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
VARS2Q5ST30 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VARS2Q5ST30 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.84■□□□□ 0.93
VARS2Q5ST30 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
VARS2Q5ST30 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
VARS2Q5ST30 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VARS2Q5ST30 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VARS2Q5ST30 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.84■□□□□ 0.93
VARS2Q5ST30 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.84■□□□□ 0.93
VARS2Q5ST30 NT5C-211ENST00000582170 653 ntTSL 3 BASIC20.84■□□□□ 0.93
VARS2Q5ST30 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
VARS2Q5ST30 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
VARS2Q5ST30 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
VARS2Q5ST30 AP001271.2-201ENST00000624018 1556 ntBASIC20.84■□□□□ 0.93
VARS2Q5ST30 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.84■□□□□ 0.93
VARS2Q5ST30 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
VARS2Q5ST30 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
VARS2Q5ST30 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.83■□□□□ 0.93
VARS2Q5ST30 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
VARS2Q5ST30 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
VARS2Q5ST30 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
VARS2Q5ST30 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.83■□□□□ 0.93
VARS2Q5ST30 B3GAT3P1-201ENST00000471720 806 ntBASIC20.83■□□□□ 0.93
VARS2Q5ST30 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.83■□□□□ 0.93
VARS2Q5ST30 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.83■□□□□ 0.93
VARS2Q5ST30 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
VARS2Q5ST30 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.83■□□□□ 0.93
VARS2Q5ST30 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.83■□□□□ 0.93
VARS2Q5ST30 AC145285.6-201ENST00000604632 637 ntBASIC20.83■□□□□ 0.93
VARS2Q5ST30 AC131212.4-201ENST00000623606 975 ntBASIC20.83■□□□□ 0.93
VARS2Q5ST30 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
VARS2Q5ST30 HLA-A-209ENST00000638375 975 ntBASIC20.83■□□□□ 0.93
VARS2Q5ST30 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
VARS2Q5ST30 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
VARS2Q5ST30 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
VARS2Q5ST30 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
VARS2Q5ST30 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
VARS2Q5ST30 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
VARS2Q5ST30 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.83■□□□□ 0.92
VARS2Q5ST30 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.83■□□□□ 0.92
VARS2Q5ST30 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
VARS2Q5ST30 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
VARS2Q5ST30 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
VARS2Q5ST30 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.82■□□□□ 0.92
VARS2Q5ST30 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
VARS2Q5ST30 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
VARS2Q5ST30 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VARS2Q5ST30 ARMC10P1-201ENST00000313754 855 ntBASIC20.82■□□□□ 0.92
VARS2Q5ST30 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VARS2Q5ST30 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VARS2Q5ST30 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20.82■□□□□ 0.92
VARS2Q5ST30 AC011506.1-201ENST00000474329 610 ntBASIC20.82■□□□□ 0.92
VARS2Q5ST30 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.82■□□□□ 0.92
VARS2Q5ST30 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.82■□□□□ 0.92
VARS2Q5ST30 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VARS2Q5ST30 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.82■□□□□ 0.92
VARS2Q5ST30 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VARS2Q5ST30 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VARS2Q5ST30 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
VARS2Q5ST30 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VARS2Q5ST30 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
VARS2Q5ST30 CYP2D8P-201ENST00000433633 1490 ntBASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms