Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
KHDC1Q4VXA5 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
KHDC1Q4VXA5 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.89■□□□□ 0.77
KHDC1Q4VXA5 UNC93B5-201ENST00000530315 699 ntBASIC19.89■□□□□ 0.77
KHDC1Q4VXA5 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
KHDC1Q4VXA5 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.89■□□□□ 0.77
KHDC1Q4VXA5 AL158211.5-201ENST00000623583 2518 ntBASIC19.89■□□□□ 0.77
KHDC1Q4VXA5 AC125437.2-201ENST00000625180 2167 ntBASIC19.88■□□□□ 0.77
KHDC1Q4VXA5 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
KHDC1Q4VXA5 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
KHDC1Q4VXA5 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
KHDC1Q4VXA5 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
KHDC1Q4VXA5 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
KHDC1Q4VXA5 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
KHDC1Q4VXA5 TSPY20P-201ENST00000450910 630 ntBASIC19.88■□□□□ 0.77
KHDC1Q4VXA5 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.88■□□□□ 0.77
KHDC1Q4VXA5 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.88■□□□□ 0.77
KHDC1Q4VXA5 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.88■□□□□ 0.77
KHDC1Q4VXA5 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
KHDC1Q4VXA5 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.88■□□□□ 0.77
KHDC1Q4VXA5 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KHDC1Q4VXA5 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KHDC1Q4VXA5 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
KHDC1Q4VXA5 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
KHDC1Q4VXA5 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KHDC1Q4VXA5 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.88■□□□□ 0.77
KHDC1Q4VXA5 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
KHDC1Q4VXA5 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.87■□□□□ 0.77
KHDC1Q4VXA5 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
KHDC1Q4VXA5 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.87■□□□□ 0.77
KHDC1Q4VXA5 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
KHDC1Q4VXA5 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.87■□□□□ 0.77
KHDC1Q4VXA5 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
KHDC1Q4VXA5 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
KHDC1Q4VXA5 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.87■□□□□ 0.77
KHDC1Q4VXA5 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.87■□□□□ 0.77
KHDC1Q4VXA5 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.87■□□□□ 0.77
KHDC1Q4VXA5 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KHDC1Q4VXA5 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KHDC1Q4VXA5 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.87■□□□□ 0.77
KHDC1Q4VXA5 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
KHDC1Q4VXA5 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KHDC1Q4VXA5 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
KHDC1Q4VXA5 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
KHDC1Q4VXA5 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KHDC1Q4VXA5 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.86■□□□□ 0.77
KHDC1Q4VXA5 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.86■□□□□ 0.77
KHDC1Q4VXA5 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
KHDC1Q4VXA5 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
KHDC1Q4VXA5 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.86■□□□□ 0.77
KHDC1Q4VXA5 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
KHDC1Q4VXA5 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KHDC1Q4VXA5 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
KHDC1Q4VXA5 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.86■□□□□ 0.77
KHDC1Q4VXA5 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
KHDC1Q4VXA5 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KHDC1Q4VXA5 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KHDC1Q4VXA5 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
KHDC1Q4VXA5 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KHDC1Q4VXA5 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.86■□□□□ 0.77
KHDC1Q4VXA5 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.86■□□□□ 0.77
KHDC1Q4VXA5 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
KHDC1Q4VXA5 AC008403.3-201ENST00000598924 454 ntBASIC19.86■□□□□ 0.77
KHDC1Q4VXA5 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.86■□□□□ 0.77
KHDC1Q4VXA5 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KHDC1Q4VXA5 AC006557.6-201ENST00000623071 864 ntBASIC19.86■□□□□ 0.77
KHDC1Q4VXA5 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KHDC1Q4VXA5 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
KHDC1Q4VXA5 TCF3P1-201ENST00000423021 1937 ntBASIC19.86■□□□□ 0.77
KHDC1Q4VXA5 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.86■□□□□ 0.77
KHDC1Q4VXA5 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.86■□□□□ 0.77
KHDC1Q4VXA5 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KHDC1Q4VXA5 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.85■□□□□ 0.77
KHDC1Q4VXA5 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KHDC1Q4VXA5 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KHDC1Q4VXA5 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
KHDC1Q4VXA5 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.85■□□□□ 0.77
KHDC1Q4VXA5 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.85■□□□□ 0.77
KHDC1Q4VXA5 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
KHDC1Q4VXA5 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
KHDC1Q4VXA5 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KHDC1Q4VXA5 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KHDC1Q4VXA5 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KHDC1Q4VXA5 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.85■□□□□ 0.77
KHDC1Q4VXA5 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.85■□□□□ 0.77
KHDC1Q4VXA5 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.85■□□□□ 0.77
KHDC1Q4VXA5 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.85■□□□□ 0.77
KHDC1Q4VXA5 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
KHDC1Q4VXA5 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KHDC1Q4VXA5 AC005829.2-201ENST00000571422 1056 ntBASIC19.85■□□□□ 0.77
KHDC1Q4VXA5 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
KHDC1Q4VXA5 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.85■□□□□ 0.77
KHDC1Q4VXA5 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
KHDC1Q4VXA5 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
KHDC1Q4VXA5 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KHDC1Q4VXA5 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
KHDC1Q4VXA5 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.85■□□□□ 0.77
KHDC1Q4VXA5 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.85■□□□□ 0.77
KHDC1Q4VXA5 NEFHP1-201ENST00000412845 2629 ntBASIC19.85■□□□□ 0.77
KHDC1Q4VXA5 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms