Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC23.06■■□□□ 1.28
CERKLQ49MI3 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC23.06■■□□□ 1.28
CERKLQ49MI3 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC23.06■■□□□ 1.28
CERKLQ49MI3 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC23.06■■□□□ 1.28
CERKLQ49MI3 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CERKLQ49MI3 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
CERKLQ49MI3 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
CERKLQ49MI3 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CERKLQ49MI3 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
CERKLQ49MI3 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
CERKLQ49MI3 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC23.06■■□□□ 1.28
CERKLQ49MI3 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CERKLQ49MI3 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC23.05■■□□□ 1.28
CERKLQ49MI3 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
CERKLQ49MI3 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
CERKLQ49MI3 LINC01568-207ENST00000641790 1380 ntBASIC23.05■■□□□ 1.28
CERKLQ49MI3 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CERKLQ49MI3 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CERKLQ49MI3 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC23.05■■□□□ 1.28
CERKLQ49MI3 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CERKLQ49MI3 TK2-213ENST00000563369 882 ntTSL 5 BASIC23.05■■□□□ 1.28
CERKLQ49MI3 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC23.05■■□□□ 1.28
CERKLQ49MI3 AC010947.1-201ENST00000623454 693 ntBASIC23.05■■□□□ 1.28
CERKLQ49MI3 HLA-A-209ENST00000638375 975 ntBASIC23.05■■□□□ 1.28
CERKLQ49MI3 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CERKLQ49MI3 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CERKLQ49MI3 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CERKLQ49MI3 AP001271.2-201ENST00000624018 1556 ntBASIC23.05■■□□□ 1.28
CERKLQ49MI3 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
CERKLQ49MI3 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC23.04■■□□□ 1.28
CERKLQ49MI3 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CERKLQ49MI3 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
CERKLQ49MI3 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC23.04■■□□□ 1.28
CERKLQ49MI3 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CERKLQ49MI3 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
CERKLQ49MI3 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC23.04■■□□□ 1.28
CERKLQ49MI3 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
CERKLQ49MI3 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC23.04■■□□□ 1.28
CERKLQ49MI3 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC23.04■■□□□ 1.28
CERKLQ49MI3 GRAMD4P8-201ENST00000605465 1115 ntBASIC23.04■■□□□ 1.28
CERKLQ49MI3 AL512408.1-201ENST00000569378 2000 ntBASIC23.04■■□□□ 1.28
CERKLQ49MI3 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
CERKLQ49MI3 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
CERKLQ49MI3 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CERKLQ49MI3 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
CERKLQ49MI3 AP005212.1-201ENST00000581547 1997 ntBASIC23.03■■□□□ 1.28
CERKLQ49MI3 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CERKLQ49MI3 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
CERKLQ49MI3 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC23.03■■□□□ 1.28
CERKLQ49MI3 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC23.03■■□□□ 1.28
CERKLQ49MI3 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC23.03■■□□□ 1.28
CERKLQ49MI3 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CERKLQ49MI3 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC23.03■■□□□ 1.28
CERKLQ49MI3 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CERKLQ49MI3 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CERKLQ49MI3 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
CERKLQ49MI3 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
CERKLQ49MI3 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CERKLQ49MI3 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CERKLQ49MI3 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC23.02■■□□□ 1.28
CERKLQ49MI3 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC23.02■■□□□ 1.28
CERKLQ49MI3 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
CERKLQ49MI3 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
CERKLQ49MI3 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CERKLQ49MI3 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
CERKLQ49MI3 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC23.02■■□□□ 1.28
CERKLQ49MI3 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC23.02■■□□□ 1.28
CERKLQ49MI3 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC23.02■■□□□ 1.28
CERKLQ49MI3 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CERKLQ49MI3 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
CERKLQ49MI3 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC23.02■■□□□ 1.28
CERKLQ49MI3 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
CERKLQ49MI3 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC23.02■■□□□ 1.28
CERKLQ49MI3 RN7SL850P-201ENST00000579959 291 ntBASIC23.02■■□□□ 1.28
CERKLQ49MI3 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CERKLQ49MI3 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CERKLQ49MI3 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC23.02■■□□□ 1.28
CERKLQ49MI3 AC005363.2-201ENST00000618631 242 ntBASIC23.02■■□□□ 1.28
CERKLQ49MI3 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC23.02■■□□□ 1.28
CERKLQ49MI3 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC23.02■■□□□ 1.28
CERKLQ49MI3 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CERKLQ49MI3 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.27
CERKLQ49MI3 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC23.01■■□□□ 1.27
CERKLQ49MI3 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CERKLQ49MI3 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CERKLQ49MI3 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CERKLQ49MI3 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CERKLQ49MI3 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CERKLQ49MI3 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
CERKLQ49MI3 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CERKLQ49MI3 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC23.01■■□□□ 1.27
CERKLQ49MI3 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CERKLQ49MI3 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
CERKLQ49MI3 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
CERKLQ49MI3 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CERKLQ49MI3 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CERKLQ49MI3 TMPOP1-202ENST00000424642 1267 ntBASIC23.01■■□□□ 1.27
CERKLQ49MI3 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
CERKLQ49MI3 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC23.01■■□□□ 1.27
CERKLQ49MI3 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC23.01■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms