Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 AP005242.2-201ENST00000580065 1175 ntBASIC21.06■□□□□ 0.96
CTC1Q2NKJ3 AL358472.4-201ENST00000633140 710 ntBASIC21.06■□□□□ 0.96
CTC1Q2NKJ3 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CTC1Q2NKJ3 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.06■□□□□ 0.96
CTC1Q2NKJ3 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CTC1Q2NKJ3 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CTC1Q2NKJ3 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CTC1Q2NKJ3 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CTC1Q2NKJ3 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CTC1Q2NKJ3 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTC1Q2NKJ3 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTC1Q2NKJ3 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTC1Q2NKJ3 AC027702.1-201ENST00000563810 1770 ntBASIC21.05■□□□□ 0.96
CTC1Q2NKJ3 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTC1Q2NKJ3 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CTC1Q2NKJ3 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTC1Q2NKJ3 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
CTC1Q2NKJ3 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.05■□□□□ 0.96
CTC1Q2NKJ3 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTC1Q2NKJ3 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTC1Q2NKJ3 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTC1Q2NKJ3 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTC1Q2NKJ3 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
CTC1Q2NKJ3 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CTC1Q2NKJ3 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
CTC1Q2NKJ3 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
CTC1Q2NKJ3 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTC1Q2NKJ3 ISCU-203ENST00000431221 799 ntTSL 2 BASIC21.05■□□□□ 0.96
CTC1Q2NKJ3 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC21.05■□□□□ 0.96
CTC1Q2NKJ3 AC063952.2-201ENST00000498792 1227 ntBASIC21.05■□□□□ 0.96
CTC1Q2NKJ3 NMU-205ENST00000511469 756 ntTSL 3 BASIC21.05■□□□□ 0.96
CTC1Q2NKJ3 C2orf69P3-201ENST00000565542 1120 ntBASIC21.05■□□□□ 0.96
CTC1Q2NKJ3 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTC1Q2NKJ3 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
CTC1Q2NKJ3 GRAMD4P8-201ENST00000605465 1115 ntBASIC21.05■□□□□ 0.96
CTC1Q2NKJ3 AL031985.4-201ENST00000642138 673 ntBASIC21.05■□□□□ 0.96
CTC1Q2NKJ3 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC21.05■□□□□ 0.96
CTC1Q2NKJ3 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC21.05■□□□□ 0.96
CTC1Q2NKJ3 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CTC1Q2NKJ3 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CTC1Q2NKJ3 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CTC1Q2NKJ3 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CTC1Q2NKJ3 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CTC1Q2NKJ3 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CTC1Q2NKJ3 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CTC1Q2NKJ3 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CTC1Q2NKJ3 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CTC1Q2NKJ3 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CTC1Q2NKJ3 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC21.04■□□□□ 0.96
CTC1Q2NKJ3 ECEL1P2-202ENST00000465689 757 ntBASIC21.04■□□□□ 0.96
CTC1Q2NKJ3 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CTC1Q2NKJ3 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CTC1Q2NKJ3 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CTC1Q2NKJ3 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CTC1Q2NKJ3 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CTC1Q2NKJ3 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CTC1Q2NKJ3 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CTC1Q2NKJ3 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CTC1Q2NKJ3 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CTC1Q2NKJ3 KRT8P36-201ENST00000489121 1440 ntBASIC21.04■□□□□ 0.96
CTC1Q2NKJ3 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CTC1Q2NKJ3 AC011484.1-201ENST00000377652 1995 ntBASIC21.03■□□□□ 0.96
CTC1Q2NKJ3 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.03■□□□□ 0.96
CTC1Q2NKJ3 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CTC1Q2NKJ3 FSCN1P1-201ENST00000568912 1481 ntBASIC21.03■□□□□ 0.96
CTC1Q2NKJ3 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CTC1Q2NKJ3 PRR31-201ENST00000371629 978 ntTSL 2 BASIC21.03■□□□□ 0.96
CTC1Q2NKJ3 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CTC1Q2NKJ3 BX664615.1-201ENST00000443558 458 ntBASIC21.03■□□□□ 0.96
CTC1Q2NKJ3 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC21.03■□□□□ 0.96
CTC1Q2NKJ3 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
CTC1Q2NKJ3 AC022616.7-201ENST00000525383 220 ntBASIC21.03■□□□□ 0.96
CTC1Q2NKJ3 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC21.03■□□□□ 0.96
CTC1Q2NKJ3 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
CTC1Q2NKJ3 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CTC1Q2NKJ3 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CTC1Q2NKJ3 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CTC1Q2NKJ3 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.03■□□□□ 0.96
CTC1Q2NKJ3 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CTC1Q2NKJ3 FEM1AP1-201ENST00000431297 1995 ntBASIC21.03■□□□□ 0.96
CTC1Q2NKJ3 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.03■□□□□ 0.96
CTC1Q2NKJ3 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.03■□□□□ 0.96
CTC1Q2NKJ3 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
CTC1Q2NKJ3 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CTC1Q2NKJ3 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.02■□□□□ 0.96
CTC1Q2NKJ3 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CTC1Q2NKJ3 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC21.02■□□□□ 0.96
CTC1Q2NKJ3 AK4P3-201ENST00000418260 669 ntBASIC21.02■□□□□ 0.96
CTC1Q2NKJ3 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC21.02■□□□□ 0.96
CTC1Q2NKJ3 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC21.02■□□□□ 0.96
CTC1Q2NKJ3 MYC-208ENST00000641036 567 ntBASIC21.02■□□□□ 0.96
CTC1Q2NKJ3 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
CTC1Q2NKJ3 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CTC1Q2NKJ3 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CTC1Q2NKJ3 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CTC1Q2NKJ3 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.02■□□□□ 0.95
CTC1Q2NKJ3 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.01■□□□□ 0.95
CTC1Q2NKJ3 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CTC1Q2NKJ3 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CTC1Q2NKJ3 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms