Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.11■□□□□ 0.497e-11■■□□□ 12.2
LSM11P83369 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.37e-11■■□□□ 12.2
LSM11P83369 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.167e-11■■□□□ 12.2
LSM11P83369 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.443e-8■■□□□ 12.2
LSM11P83369 DHRS2-206ENST00000556550 2595 nt13.28□□□□□ -0.281e-32■■□□□ 12.2
LSM11P83369 CHTF18-206ENST00000461268 814 ntTSL 515.47■□□□□ 0.071e-6■■□□□ 12.2
LSM11P83369 AGRN-205ENST00000469403 899 ntTSL 323.68■■□□□ 1.387e-6■■□□□ 12.1
LSM11P83369 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.137e-6■■□□□ 12.1
LSM11P83369 RANBP1-204ENST00000416427 645 ntTSL 521.72■■□□□ 1.077e-6■■□□□ 12.1
LSM11P83369 AGRN-206ENST00000477585 707 ntTSL 321.17■□□□□ 0.987e-6■■□□□ 12.1
LSM11P83369 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.84■□□□□ 0.937e-6■■□□□ 12.1
LSM11P83369 GNB1-207ENST00000472614 708 ntTSL 219.95■□□□□ 0.787e-6■■□□□ 12.1
LSM11P83369 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.25■□□□□ 0.677e-6■■□□□ 12.1
LSM11P83369 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.581e-6■■□□□ 12.1
LSM11P83369 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.457e-6■■□□□ 12.1
LSM11P83369 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.47e-6■■□□□ 12.1
LSM11P83369 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.53■□□□□ 0.47e-6■■□□□ 12.1
LSM11P83369 C1orf159-212ENST00000467751 2099 ntTSL 217.4■□□□□ 0.387e-6■■□□□ 12.1
LSM11P83369 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.3■□□□□ 0.367e-6■■□□□ 12.1
LSM11P83369 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.331e-6■■□□□ 12.1
LSM11P83369 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.297e-6■■□□□ 12.1
LSM11P83369 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.277e-6■■□□□ 12.1
LSM11P83369 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.137e-6■■□□□ 12.1
LSM11P83369 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.54■□□□□ 0.081e-6■■□□□ 12.1
LSM11P83369 C1orf159-203ENST00000379325 2010 ntTSL 215.38■□□□□ 0.057e-6■■□□□ 12.1
LSM11P83369 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.33■□□□□ 0.057e-6■■□□□ 12.1
LSM11P83369 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.18■□□□□ 0.027e-6■■□□□ 12.1
LSM11P83369 DCAF15-204ENST00000588523 989 ntTSL 515.1■□□□□ 0.017e-6■■□□□ 12.1
LSM11P83369 C1orf159-219ENST00000487177 3315 ntTSL 215.05■□□□□ -07e-6■■□□□ 12.1
LSM11P83369 C1orf159-211ENST00000465822 1933 ntTSL 214.79□□□□□ -0.047e-6■■□□□ 12.1
LSM11P83369 UNC13D-216ENST00000591616 659 ntTSL 314.7□□□□□ -0.067e-6■■□□□ 12.1
LSM11P83369 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.077e-6■■□□□ 12.1
LSM11P83369 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.55□□□□□ -0.087e-6■■□□□ 12.1
LSM11P83369 RPS9-209ENST00000448962 2384 ntTSL 214.4□□□□□ -0.17e-6■■□□□ 12.1
LSM11P83369 RANBP1-206ENST00000421656 333 ntTSL 314.21□□□□□ -0.137e-6■■□□□ 12.1
LSM11P83369 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.88□□□□□ -0.197e-6■■□□□ 12.1
LSM11P83369 P2RY11-202ENST00000471843 554 ntTSL 413.54□□□□□ -0.241e-6■■□□□ 12.1
LSM11P83369 RABL6-209ENST00000466096 3949 ntTSL 1 (best)13.45□□□□□ -0.267e-6■■□□□ 12.1
LSM11P83369 C1orf159-216ENST00000477196 3214 ntTSL 213.05□□□□□ -0.327e-6■■□□□ 12.1
LSM11P83369 C1orf159-210ENST00000464905 650 ntTSL 313.01□□□□□ -0.337e-6■■□□□ 12.1
LSM11P83369 DGCR2-202ENST00000389262 4814 ntTSL 1 (best)12.78□□□□□ -0.367e-6■■□□□ 12.1
LSM11P83369 FAM60A-204ENST00000536836 1734 ntTSL 212.54□□□□□ -0.47e-6■■□□□ 12.1
LSM11P83369 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC12.4□□□□□ -0.427e-6■■□□□ 12.1
LSM11P83369 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.457e-6■■□□□ 12.1
LSM11P83369 RPS9-206ENST00000436445 752 ntTSL 212.24□□□□□ -0.457e-6■■□□□ 12.1
LSM11P83369 RPS9-208ENST00000445961 944 ntTSL 512.24□□□□□ -0.457e-6■■□□□ 12.1
LSM11P83369 PRMT5-202ENST00000324366 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.457e-6■■□□□ 12.1
LSM11P83369 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.467e-6■■□□□ 12.1
LSM11P83369 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC12.08□□□□□ -0.487e-6■■□□□ 12.1
LSM11P83369 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.547e-6■■□□□ 12.1
LSM11P83369 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC11.7□□□□□ -0.547e-6■■□□□ 12.1
LSM11P83369 DCAF15-203ENST00000587307 711 ntTSL 211.47□□□□□ -0.577e-6■■□□□ 12.1
LSM11P83369 RPS9-212ENST00000495002 956 ntTSL 1 (best)11.44□□□□□ -0.587e-6■■□□□ 12.1
LSM11P83369 DGCR2-205ENST00000537045 4361 ntTSL 2 BASIC10.73□□□□□ -0.697e-6■■□□□ 12.1
LSM11P83369 RPL32P3-205ENST00000507287 1555 ntTSL 1 (best) BASIC10.62□□□□□ -0.717e-6■■□□□ 12.1
LSM11P83369 FAM60A-206ENST00000539409 2532 ntTSL 1 (best) BASIC10.38□□□□□ -0.757e-6■■□□□ 12.1
LSM11P83369 RPL32P3-206ENST00000510078 2161 ntTSL 1 (best) BASIC9.81□□□□□ -0.847e-6■■□□□ 12.1
LSM11P83369 FAM60A-201ENST00000337682 3163 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.877e-6■■□□□ 12.1
LSM11P83369 UCKL1-205ENST00000483710 524 ntTSL 39.07□□□□□ -0.967e-6■■□□□ 12.1
LSM11P83369 FAM60A-205ENST00000539004 459 ntTSL 58.49□□□□□ -1.057e-6■■□□□ 12.1
LSM11P83369 SNX8-207ENST00000479689 560 ntTSL 28.36□□□□□ -1.077e-6■■□□□ 12.1
LSM11P83369 PRMT5-207ENST00000476175 682 ntTSL 26.29□□□□□ -1.47e-6■■□□□ 12.1
LSM11P83369 PRMT5-226ENST00000557443 337 ntTSL 35.16□□□□□ -1.587e-6■■□□□ 12.1
LSM11P83369 TAF15-203ENST00000603393 1214 ntTSL 1 (best)15.39■□□□□ 0.051e-6■■□□□ 12.1
LSM11P83369 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.051e-6■■□□□ 12.1
LSM11P83369 DEAF1-206ENST00000526857 567 ntTSL 313.17□□□□□ -0.31e-6■■□□□ 12.1
LSM11P83369 DEAF1-203ENST00000525626 585 ntTSL 312.47□□□□□ -0.411e-6■■□□□ 12.1
LSM11P83369 TAF15-212ENST00000604879 808 ntTSL 512.21□□□□□ -0.451e-6■■□□□ 12.1
LSM11P83369 DCAF16-201ENST00000382247 4548 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.461e-6■■□□□ 12.1
LSM11P83369 SMAD3-214ENST00000560402 590 ntTSL 411.81□□□□□ -0.521e-6■■□□□ 12.1
LSM11P83369 L3MBTL4-201ENST00000317931 3560 ntTSL 5 BASIC11.41□□□□□ -0.582e-12■■□□□ 12.1
LSM11P83369 L3MBTL4-202ENST00000400104 4534 ntTSL 1 (best) BASIC9.16□□□□□ -0.942e-12■■□□□ 12.1
LSM11P83369 TAF15-201ENST00000603067 580 ntTSL 59.15□□□□□ -0.941e-6■■□□□ 12.1
LSM11P83369 L3MBTL4-203ENST00000400105 3546 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.082e-12■■□□□ 12.1
LSM11P83369 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.215e-7■■□□□ 12.1
LSM11P83369 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.425e-7■■□□□ 12.1
LSM11P83369 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.425e-7■■□□□ 12.1
LSM11P83369 METTL17-216ENST00000555533 1605 ntTSL 1 (best)11.49□□□□□ -0.575e-7■■□□□ 12.1
LSM11P83369 METTL17-217ENST00000555640 2887 ntTSL 511.14□□□□□ -0.635e-7■■□□□ 12.1
LSM11P83369 METTL17-224ENST00000557550 1529 ntTSL 510.18□□□□□ -0.785e-7■■□□□ 12.1
LSM11P83369 METTL17-211ENST00000554849 915 ntTSL 59.37□□□□□ -0.915e-7■■□□□ 12.1
LSM11P83369 METTL17-203ENST00000553389 952 ntTSL 28.44□□□□□ -1.065e-7■■□□□ 12.1
LSM11P83369 METTL17-208ENST00000554354 249 ntTSL 56.32□□□□□ -1.45e-7■■□□□ 12.1
LSM11P83369 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.066e-6■■□□□ 12.1
LSM11P83369 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.89■□□□□ 0.776e-6■■□□□ 12.1
LSM11P83369 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.11■□□□□ 0.656e-6■■□□□ 12.1
LSM11P83369 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.636e-6■■□□□ 12.1
LSM11P83369 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.74■□□□□ 0.596e-6■■□□□ 12.1
LSM11P83369 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.71■□□□□ 0.596e-6■■□□□ 12.1
LSM11P83369 GSDMD-216ENST00000534602 480 ntTSL 218.58■□□□□ 0.566e-6■■□□□ 12.1
LSM11P83369 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.556e-6■■□□□ 12.1
LSM11P83369 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.39■□□□□ 0.376e-6■■□□□ 12.1
LSM11P83369 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.356e-6■■□□□ 12.1
LSM11P83369 RASSF4-211ENST00000489171 4350 ntTSL 1 (best)17.1■□□□□ 0.336e-6■■□□□ 12.1
LSM11P83369 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.82■□□□□ 0.286e-6■■□□□ 12.1
LSM11P83369 PKMYT1-219ENST00000575981 910 ntTSL 216.32■□□□□ 0.26e-6■■□□□ 12.1
LSM11P83369 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.146e-6■■□□□ 12.1
LSM11P83369 EIF2B4-209ENST00000478311 607 ntTSL 215.73■□□□□ 0.116e-6■■□□□ 12.1
LSM11P83369 AKR1A1-208ENST00000476957 910 ntTSL 315.36■□□□□ 0.056e-6■■□□□ 12.1
LSM11P83369 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.36■□□□□ 0.056e-6■■□□□ 12.1
Retrieved 100 of 11,495 protein–RNA pairs in 82.5 ms