Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
LSM3P62310 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LSM3P62310 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.72■□□□□ 0.43
LSM3P62310 AC005224.4-201ENST00000583262 1652 ntBASIC17.72■□□□□ 0.43
LSM3P62310 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LSM3P62310 AC012354.3-201ENST00000623734 483 ntBASIC17.72■□□□□ 0.43
LSM3P62310 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC17.72■□□□□ 0.43
LSM3P62310 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC17.72■□□□□ 0.43
LSM3P62310 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.72■□□□□ 0.43
LSM3P62310 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.72■□□□□ 0.43
LSM3P62310 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
LSM3P62310 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
LSM3P62310 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.72■□□□□ 0.43
LSM3P62310 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LSM3P62310 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LSM3P62310 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LSM3P62310 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LSM3P62310 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.72■□□□□ 0.43
LSM3P62310 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LSM3P62310 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
LSM3P62310 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LSM3P62310 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LSM3P62310 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.71■□□□□ 0.43
LSM3P62310 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.71■□□□□ 0.43
LSM3P62310 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
LSM3P62310 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LSM3P62310 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LSM3P62310 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
LSM3P62310 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LSM3P62310 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC17.71■□□□□ 0.43
LSM3P62310 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LSM3P62310 RARRES2P11-201ENST00000635158 484 ntBASIC17.71■□□□□ 0.43
LSM3P62310 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
LSM3P62310 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LSM3P62310 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.71■□□□□ 0.43
LSM3P62310 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.71■□□□□ 0.43
LSM3P62310 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LSM3P62310 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LSM3P62310 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
LSM3P62310 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
LSM3P62310 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC17.71■□□□□ 0.43
LSM3P62310 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LSM3P62310 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.71■□□□□ 0.42
LSM3P62310 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
LSM3P62310 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LSM3P62310 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LSM3P62310 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.7■□□□□ 0.42
LSM3P62310 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
LSM3P62310 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LSM3P62310 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LSM3P62310 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
LSM3P62310 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LSM3P62310 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LSM3P62310 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
LSM3P62310 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LSM3P62310 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.7■□□□□ 0.42
LSM3P62310 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC17.7■□□□□ 0.42
LSM3P62310 SRD5A1P1-201ENST00000442297 786 ntBASIC17.7■□□□□ 0.42
LSM3P62310 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.7■□□□□ 0.42
LSM3P62310 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.7■□□□□ 0.42
LSM3P62310 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
LSM3P62310 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
LSM3P62310 AC020916.1-201ENST00000587762 1774 ntBASIC17.7■□□□□ 0.42
LSM3P62310 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.7■□□□□ 0.42
LSM3P62310 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.7■□□□□ 0.42
LSM3P62310 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
LSM3P62310 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LSM3P62310 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
LSM3P62310 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LSM3P62310 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
LSM3P62310 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LSM3P62310 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LSM3P62310 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LSM3P62310 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LSM3P62310 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
LSM3P62310 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.69■□□□□ 0.42
LSM3P62310 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LSM3P62310 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LSM3P62310 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.69■□□□□ 0.42
LSM3P62310 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
LSM3P62310 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LSM3P62310 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LSM3P62310 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LSM3P62310 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LSM3P62310 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
LSM3P62310 SERBP1P1-201ENST00000396021 1160 ntBASIC17.69■□□□□ 0.42
LSM3P62310 UNC93B8-201ENST00000511903 705 ntBASIC17.69■□□□□ 0.42
LSM3P62310 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC17.69■□□□□ 0.42
LSM3P62310 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.69■□□□□ 0.42
LSM3P62310 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LSM3P62310 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LSM3P62310 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LSM3P62310 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LSM3P62310 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LSM3P62310 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
LSM3P62310 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LSM3P62310 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LSM3P62310 AC068880.1-201ENST00000507289 2297 ntBASIC17.69■□□□□ 0.42
LSM3P62310 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.69■□□□□ 0.42
LSM3P62310 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms