Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CKS1BP61024 MFF-208ENST00000409616 1247 ntTSL 5 BASIC13.73□□□□□ -0.21
CKS1BP61024 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CKS1BP61024 AC133561.4-201ENST00000566112 224 ntBASIC13.73□□□□□ -0.21
CKS1BP61024 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CKS1BP61024 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CKS1BP61024 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CKS1BP61024 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC13.73□□□□□ -0.21
CKS1BP61024 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CKS1BP61024 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CKS1BP61024 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CKS1BP61024 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CKS1BP61024 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CKS1BP61024 AP004607.4-201ENST00000530158 1459 ntBASIC13.73□□□□□ -0.21
CKS1BP61024 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC13.73□□□□□ -0.21
CKS1BP61024 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
CKS1BP61024 AC011484.1-201ENST00000377652 1995 ntBASIC13.72□□□□□ -0.21
CKS1BP61024 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CKS1BP61024 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CKS1BP61024 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CKS1BP61024 PRORSD1P-202ENST00000563365 2154 ntBASIC13.72□□□□□ -0.21
CKS1BP61024 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CKS1BP61024 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
CKS1BP61024 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC13.72□□□□□ -0.21
CKS1BP61024 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CKS1BP61024 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC13.72□□□□□ -0.21
CKS1BP61024 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
CKS1BP61024 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CKS1BP61024 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CKS1BP61024 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CKS1BP61024 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CKS1BP61024 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC13.72□□□□□ -0.21
CKS1BP61024 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CKS1BP61024 UNC93B3-201ENST00000308076 687 ntBASIC13.72□□□□□ -0.21
CKS1BP61024 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
CKS1BP61024 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CKS1BP61024 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CKS1BP61024 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC13.72□□□□□ -0.21
CKS1BP61024 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC13.72□□□□□ -0.21
CKS1BP61024 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CKS1BP61024 RNF146-206ENST00000480444 843 ntTSL 2 BASIC13.72□□□□□ -0.21
CKS1BP61024 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CKS1BP61024 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CKS1BP61024 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CKS1BP61024 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CKS1BP61024 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CKS1BP61024 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC13.72□□□□□ -0.21
CKS1BP61024 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CKS1BP61024 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CKS1BP61024 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
CKS1BP61024 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CKS1BP61024 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CKS1BP61024 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CKS1BP61024 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CKS1BP61024 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC13.72□□□□□ -0.21
CKS1BP61024 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CKS1BP61024 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CKS1BP61024 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC13.72□□□□□ -0.21
CKS1BP61024 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CKS1BP61024 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CKS1BP61024 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
CKS1BP61024 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CKS1BP61024 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CKS1BP61024 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC13.71□□□□□ -0.21
CKS1BP61024 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
CKS1BP61024 BX005040.4-201ENST00000637145 1518 ntBASIC13.71□□□□□ -0.21
CKS1BP61024 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CKS1BP61024 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
CKS1BP61024 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CKS1BP61024 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CKS1BP61024 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CKS1BP61024 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CKS1BP61024 GRAMD4P2-201ENST00000423297 1097 ntBASIC13.71□□□□□ -0.21
CKS1BP61024 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC13.71□□□□□ -0.21
CKS1BP61024 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC13.71□□□□□ -0.21
CKS1BP61024 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC13.71□□□□□ -0.21
CKS1BP61024 DET1-207ENST00000564406 2315 ntTSL 2 BASIC13.71□□□□□ -0.21
CKS1BP61024 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CKS1BP61024 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC13.71□□□□□ -0.21
CKS1BP61024 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CKS1BP61024 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CKS1BP61024 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CKS1BP61024 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC13.71□□□□□ -0.22
CKS1BP61024 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
CKS1BP61024 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CKS1BP61024 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
CKS1BP61024 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CKS1BP61024 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
CKS1BP61024 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.22
CKS1BP61024 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CKS1BP61024 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CKS1BP61024 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CKS1BP61024 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CKS1BP61024 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CKS1BP61024 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CKS1BP61024 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CKS1BP61024 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC13.7□□□□□ -0.22
CKS1BP61024 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC13.7□□□□□ -0.22
CKS1BP61024 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CKS1BP61024 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms