Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
AP1S2P56377 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
AP1S2P56377 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
AP1S2P56377 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.17■□□□□ 0.66
AP1S2P56377 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.17■□□□□ 0.66
AP1S2P56377 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
AP1S2P56377 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
AP1S2P56377 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.16■□□□□ 0.66
AP1S2P56377 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.16■□□□□ 0.66
AP1S2P56377 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
AP1S2P56377 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.16■□□□□ 0.66
AP1S2P56377 AC124283.5-201ENST00000624661 1809 ntBASIC19.16■□□□□ 0.66
AP1S2P56377 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
AP1S2P56377 AL158211.5-201ENST00000623583 2518 ntBASIC19.16■□□□□ 0.66
AP1S2P56377 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.16■□□□□ 0.66
AP1S2P56377 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
AP1S2P56377 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
AP1S2P56377 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
AP1S2P56377 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.16■□□□□ 0.66
AP1S2P56377 UNC93B4-201ENST00000505679 747 ntBASIC19.16■□□□□ 0.66
AP1S2P56377 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.16■□□□□ 0.66
AP1S2P56377 UNC93B5-201ENST00000530315 699 ntBASIC19.16■□□□□ 0.66
AP1S2P56377 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.16■□□□□ 0.66
AP1S2P56377 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
AP1S2P56377 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
AP1S2P56377 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
AP1S2P56377 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
AP1S2P56377 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
AP1S2P56377 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.16■□□□□ 0.66
AP1S2P56377 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
AP1S2P56377 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.15■□□□□ 0.66
AP1S2P56377 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
AP1S2P56377 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
AP1S2P56377 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
AP1S2P56377 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
AP1S2P56377 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
AP1S2P56377 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
AP1S2P56377 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
AP1S2P56377 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
AP1S2P56377 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.15■□□□□ 0.66
AP1S2P56377 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
AP1S2P56377 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
AP1S2P56377 AL121829.2-201ENST00000620908 328 ntBASIC19.15■□□□□ 0.66
AP1S2P56377 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.15■□□□□ 0.66
AP1S2P56377 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
AP1S2P56377 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
AP1S2P56377 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.15■□□□□ 0.66
AP1S2P56377 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.15■□□□□ 0.66
AP1S2P56377 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
AP1S2P56377 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
AP1S2P56377 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
AP1S2P56377 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
AP1S2P56377 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
AP1S2P56377 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
AP1S2P56377 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
AP1S2P56377 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.14■□□□□ 0.65
AP1S2P56377 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.14■□□□□ 0.65
AP1S2P56377 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
AP1S2P56377 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
AP1S2P56377 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
AP1S2P56377 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
AP1S2P56377 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
AP1S2P56377 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
AP1S2P56377 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
AP1S2P56377 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
AP1S2P56377 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
AP1S2P56377 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
AP1S2P56377 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
AP1S2P56377 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
AP1S2P56377 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
AP1S2P56377 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
AP1S2P56377 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.14■□□□□ 0.65
AP1S2P56377 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
AP1S2P56377 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
AP1S2P56377 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.13■□□□□ 0.65
AP1S2P56377 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
AP1S2P56377 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
AP1S2P56377 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.13■□□□□ 0.65
AP1S2P56377 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.13■□□□□ 0.65
AP1S2P56377 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.13■□□□□ 0.65
AP1S2P56377 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.13■□□□□ 0.65
AP1S2P56377 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.13■□□□□ 0.65
AP1S2P56377 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.13■□□□□ 0.65
AP1S2P56377 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
AP1S2P56377 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
AP1S2P56377 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.13■□□□□ 0.65
AP1S2P56377 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
AP1S2P56377 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
AP1S2P56377 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
AP1S2P56377 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
AP1S2P56377 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
AP1S2P56377 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
AP1S2P56377 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.12■□□□□ 0.65
AP1S2P56377 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
AP1S2P56377 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
AP1S2P56377 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
AP1S2P56377 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.12■□□□□ 0.65
AP1S2P56377 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
AP1S2P56377 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.12■□□□□ 0.65
AP1S2P56377 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms