Protein–RNA interactions for Protein: P54253

ATXN1, Ataxin-1, humanhuman

Known RBP Predictions only

Length 815 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1P54253 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATXN1P54253 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ATXN1P54253 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.67■□□□□ 0.9
ATXN1P54253 AC120498.8-201ENST00000614275 531 ntBASIC20.67■□□□□ 0.9
ATXN1P54253 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.67■□□□□ 0.9
ATXN1P54253 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATXN1P54253 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATXN1P54253 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
ATXN1P54253 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ATXN1P54253 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
ATXN1P54253 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATXN1P54253 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATXN1P54253 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
ATXN1P54253 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
ATXN1P54253 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATXN1P54253 AC012618.2-201ENST00000428058 849 ntBASIC20.66■□□□□ 0.9
ATXN1P54253 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.66■□□□□ 0.9
ATXN1P54253 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.66■□□□□ 0.9
ATXN1P54253 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.66■□□□□ 0.9
ATXN1P54253 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.66■□□□□ 0.9
ATXN1P54253 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.66■□□□□ 0.9
ATXN1P54253 AC233702.5-201ENST00000584107 538 ntBASIC20.66■□□□□ 0.9
ATXN1P54253 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ATXN1P54253 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
ATXN1P54253 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ATXN1P54253 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.66■□□□□ 0.9
ATXN1P54253 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.66■□□□□ 0.9
ATXN1P54253 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.66■□□□□ 0.9
ATXN1P54253 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATXN1P54253 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATXN1P54253 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATXN1P54253 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATXN1P54253 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATXN1P54253 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
ATXN1P54253 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.65■□□□□ 0.9
ATXN1P54253 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATXN1P54253 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
ATXN1P54253 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATXN1P54253 PHGDH-210ENST00000641115 1638 ntBASIC20.65■□□□□ 0.9
ATXN1P54253 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATXN1P54253 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ATXN1P54253 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.65■□□□□ 0.9
ATXN1P54253 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATXN1P54253 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.65■□□□□ 0.9
ATXN1P54253 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ATXN1P54253 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.65■□□□□ 0.9
ATXN1P54253 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
ATXN1P54253 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
ATXN1P54253 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.65■□□□□ 0.9
ATXN1P54253 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATXN1P54253 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ATXN1P54253 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ATXN1P54253 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.64■□□□□ 0.9
ATXN1P54253 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
ATXN1P54253 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ATXN1P54253 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.64■□□□□ 0.9
ATXN1P54253 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.64■□□□□ 0.9
ATXN1P54253 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
ATXN1P54253 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATXN1P54253 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ATXN1P54253 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
ATXN1P54253 RPS2P55-201ENST00000397318 883 ntBASIC20.64■□□□□ 0.89
ATXN1P54253 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATXN1P54253 AC107956.1-201ENST00000494359 873 ntBASIC20.64■□□□□ 0.89
ATXN1P54253 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
ATXN1P54253 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
ATXN1P54253 AC233263.1-201ENST00000578059 224 ntBASIC20.64■□□□□ 0.89
ATXN1P54253 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
ATXN1P54253 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ATXN1P54253 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATXN1P54253 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATXN1P54253 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATXN1P54253 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ATXN1P54253 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.64■□□□□ 0.89
ATXN1P54253 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
ATXN1P54253 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATXN1P54253 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATXN1P54253 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.63■□□□□ 0.89
ATXN1P54253 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATXN1P54253 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
ATXN1P54253 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.63■□□□□ 0.89
ATXN1P54253 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
ATXN1P54253 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.63■□□□□ 0.89
ATXN1P54253 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ATXN1P54253 TSPY15P-201ENST00000457163 923 ntBASIC20.63■□□□□ 0.89
ATXN1P54253 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ATXN1P54253 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.63■□□□□ 0.89
ATXN1P54253 CD177P1-201ENST00000606252 935 ntBASIC20.63■□□□□ 0.89
ATXN1P54253 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.63■□□□□ 0.89
ATXN1P54253 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.63■□□□□ 0.89
ATXN1P54253 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.63■□□□□ 0.89
ATXN1P54253 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
ATXN1P54253 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.63■□□□□ 0.89
ATXN1P54253 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATXN1P54253 AC018553.1-201ENST00000616682 1458 ntBASIC20.62■□□□□ 0.89
ATXN1P54253 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.62■□□□□ 0.89
ATXN1P54253 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
ATXN1P54253 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATXN1P54253 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATXN1P54253 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms