Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
RNF144AP50876 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF144AP50876 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF144AP50876 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF144AP50876 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.25■□□□□ 0.51
RNF144AP50876 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF144AP50876 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.25■□□□□ 0.51
RNF144AP50876 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.25■□□□□ 0.51
RNF144AP50876 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RNF144AP50876 AC023632.3-201ENST00000521633 145 ntBASIC18.25■□□□□ 0.51
RNF144AP50876 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.25■□□□□ 0.51
RNF144AP50876 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.25■□□□□ 0.51
RNF144AP50876 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.25■□□□□ 0.51
RNF144AP50876 AC120498.9-201ENST00000339021 3867 ntBASIC18.25■□□□□ 0.51
RNF144AP50876 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF144AP50876 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF144AP50876 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF144AP50876 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF144AP50876 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RNF144AP50876 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
RNF144AP50876 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF144AP50876 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF144AP50876 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.24■□□□□ 0.51
RNF144AP50876 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
RNF144AP50876 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF144AP50876 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF144AP50876 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF144AP50876 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF144AP50876 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.24■□□□□ 0.51
RNF144AP50876 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.24■□□□□ 0.51
RNF144AP50876 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.24■□□□□ 0.51
RNF144AP50876 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
RNF144AP50876 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF144AP50876 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF144AP50876 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF144AP50876 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF144AP50876 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
RNF144AP50876 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF144AP50876 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF144AP50876 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF144AP50876 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
RNF144AP50876 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF144AP50876 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RNF144AP50876 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
RNF144AP50876 AC116562.4-201ENST00000641316 2276 ntBASIC18.23■□□□□ 0.51
RNF144AP50876 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF144AP50876 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.23■□□□□ 0.51
RNF144AP50876 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RNF144AP50876 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.23■□□□□ 0.51
RNF144AP50876 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RNF144AP50876 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
RNF144AP50876 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF144AP50876 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RNF144AP50876 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.23■□□□□ 0.51
RNF144AP50876 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
RNF144AP50876 AC142086.2-201ENST00000569753 217 ntBASIC18.23■□□□□ 0.51
RNF144AP50876 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RNF144AP50876 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
RNF144AP50876 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RNF144AP50876 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF144AP50876 TMEM179-206ENST00000616017 1645 ntBASIC18.23■□□□□ 0.51
RNF144AP50876 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
RNF144AP50876 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RNF144AP50876 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF144AP50876 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF144AP50876 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.23■□□□□ 0.51
RNF144AP50876 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.23■□□□□ 0.51
RNF144AP50876 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF144AP50876 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.22■□□□□ 0.51
RNF144AP50876 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
RNF144AP50876 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RNF144AP50876 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF144AP50876 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF144AP50876 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
RNF144AP50876 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF144AP50876 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.22■□□□□ 0.51
RNF144AP50876 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
RNF144AP50876 AL390719.1-204ENST00000412397 1219 ntBASIC18.22■□□□□ 0.51
RNF144AP50876 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.22■□□□□ 0.51
RNF144AP50876 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.22■□□□□ 0.51
RNF144AP50876 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.22■□□□□ 0.51
RNF144AP50876 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RNF144AP50876 AC133041.1-202ENST00000642053 222 ntBASIC18.22■□□□□ 0.51
RNF144AP50876 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
RNF144AP50876 PHGDH-210ENST00000641115 1638 ntBASIC18.22■□□□□ 0.51
RNF144AP50876 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
RNF144AP50876 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.22■□□□□ 0.51
RNF144AP50876 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF144AP50876 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF144AP50876 BX323043.1-201ENST00000641006 1765 ntBASIC18.22■□□□□ 0.51
RNF144AP50876 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.22■□□□□ 0.51
RNF144AP50876 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RNF144AP50876 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RNF144AP50876 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF144AP50876 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF144AP50876 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF144AP50876 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF144AP50876 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF144AP50876 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
RNF144AP50876 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms