Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
CHRNA4P43681 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.86■□□□□ 0.77
CHRNA4P43681 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.86■□□□□ 0.77
CHRNA4P43681 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHRNA4P43681 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHRNA4P43681 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHRNA4P43681 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHRNA4P43681 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CHRNA4P43681 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CHRNA4P43681 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHRNA4P43681 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHRNA4P43681 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHRNA4P43681 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CHRNA4P43681 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHRNA4P43681 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHRNA4P43681 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CHRNA4P43681 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CHRNA4P43681 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHRNA4P43681 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.85■□□□□ 0.77
CHRNA4P43681 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHRNA4P43681 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.85■□□□□ 0.77
CHRNA4P43681 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.85■□□□□ 0.77
CHRNA4P43681 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CHRNA4P43681 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CHRNA4P43681 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHRNA4P43681 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHRNA4P43681 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.85■□□□□ 0.77
CHRNA4P43681 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CHRNA4P43681 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CHRNA4P43681 AP003097.1-201ENST00000530657 1135 ntBASIC19.85■□□□□ 0.77
CHRNA4P43681 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CHRNA4P43681 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CHRNA4P43681 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.85■□□□□ 0.77
CHRNA4P43681 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.85■□□□□ 0.77
CHRNA4P43681 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CHRNA4P43681 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CHRNA4P43681 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHRNA4P43681 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHRNA4P43681 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHRNA4P43681 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHRNA4P43681 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHRNA4P43681 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHRNA4P43681 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHRNA4P43681 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CHRNA4P43681 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHRNA4P43681 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHRNA4P43681 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHRNA4P43681 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHRNA4P43681 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHRNA4P43681 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHRNA4P43681 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHRNA4P43681 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.84■□□□□ 0.77
CHRNA4P43681 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.84■□□□□ 0.77
CHRNA4P43681 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.84■□□□□ 0.77
CHRNA4P43681 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.84■□□□□ 0.77
CHRNA4P43681 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHRNA4P43681 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHRNA4P43681 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHRNA4P43681 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHRNA4P43681 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.84■□□□□ 0.77
CHRNA4P43681 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHRNA4P43681 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.84■□□□□ 0.77
CHRNA4P43681 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.84■□□□□ 0.77
CHRNA4P43681 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHRNA4P43681 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHRNA4P43681 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHRNA4P43681 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.83■□□□□ 0.77
CHRNA4P43681 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
CHRNA4P43681 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
CHRNA4P43681 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.83■□□□□ 0.77
CHRNA4P43681 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHRNA4P43681 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.83■□□□□ 0.77
CHRNA4P43681 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHRNA4P43681 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CHRNA4P43681 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CHRNA4P43681 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.83■□□□□ 0.77
CHRNA4P43681 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.77
CHRNA4P43681 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHRNA4P43681 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.83■□□□□ 0.77
CHRNA4P43681 AC233263.1-201ENST00000578059 224 ntBASIC19.83■□□□□ 0.77
CHRNA4P43681 MIR4651-201ENST00000582622 73 ntBASIC19.83■□□□□ 0.77
CHRNA4P43681 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHRNA4P43681 AL121906.2-201ENST00000621597 723 ntBASIC19.83■□□□□ 0.77
CHRNA4P43681 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CHRNA4P43681 AC116562.4-201ENST00000641316 2276 ntBASIC19.83■□□□□ 0.76
CHRNA4P43681 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.83■□□□□ 0.76
CHRNA4P43681 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CHRNA4P43681 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.83■□□□□ 0.76
CHRNA4P43681 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.83■□□□□ 0.76
CHRNA4P43681 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CHRNA4P43681 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.83■□□□□ 0.76
CHRNA4P43681 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CHRNA4P43681 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHRNA4P43681 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.82■□□□□ 0.76
CHRNA4P43681 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CHRNA4P43681 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.82■□□□□ 0.76
CHRNA4P43681 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHRNA4P43681 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHRNA4P43681 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.82■□□□□ 0.76
CHRNA4P43681 POM121L13P-201ENST00000422362 380 ntBASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms