Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
FDFT1P37268 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
FDFT1P37268 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.05■□□□□ 0.8
FDFT1P37268 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
FDFT1P37268 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
FDFT1P37268 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.05■□□□□ 0.8
FDFT1P37268 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
FDFT1P37268 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
FDFT1P37268 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
FDFT1P37268 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
FDFT1P37268 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
FDFT1P37268 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
FDFT1P37268 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
FDFT1P37268 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FDFT1P37268 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
FDFT1P37268 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.04■□□□□ 0.8
FDFT1P37268 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.04■□□□□ 0.8
FDFT1P37268 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
FDFT1P37268 AC087289.5-201ENST00000586076 3175 ntBASIC20.04■□□□□ 0.8
FDFT1P37268 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
FDFT1P37268 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FDFT1P37268 BX323043.1-201ENST00000641006 1765 ntBASIC20.04■□□□□ 0.8
FDFT1P37268 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
FDFT1P37268 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
FDFT1P37268 SLC29A4P1-201ENST00000398760 971 ntBASIC20.04■□□□□ 0.8
FDFT1P37268 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.04■□□□□ 0.8
FDFT1P37268 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.04■□□□□ 0.8
FDFT1P37268 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.04■□□□□ 0.8
FDFT1P37268 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
FDFT1P37268 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.04■□□□□ 0.8
FDFT1P37268 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
FDFT1P37268 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.04■□□□□ 0.8
FDFT1P37268 AC091874.3-201ENST00000512672 1195 ntBASIC20.04■□□□□ 0.8
FDFT1P37268 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.04■□□□□ 0.8
FDFT1P37268 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
FDFT1P37268 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FDFT1P37268 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FDFT1P37268 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FDFT1P37268 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
FDFT1P37268 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
FDFT1P37268 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
FDFT1P37268 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FDFT1P37268 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
FDFT1P37268 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
FDFT1P37268 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
FDFT1P37268 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
FDFT1P37268 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FDFT1P37268 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
FDFT1P37268 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
FDFT1P37268 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
FDFT1P37268 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
FDFT1P37268 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
FDFT1P37268 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.03■□□□□ 0.8
FDFT1P37268 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FDFT1P37268 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
FDFT1P37268 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.03■□□□□ 0.8
FDFT1P37268 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.03■□□□□ 0.8
FDFT1P37268 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
FDFT1P37268 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.03■□□□□ 0.8
FDFT1P37268 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.03■□□□□ 0.8
FDFT1P37268 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.03■□□□□ 0.8
FDFT1P37268 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.03■□□□□ 0.8
FDFT1P37268 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.03■□□□□ 0.8
FDFT1P37268 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
FDFT1P37268 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FDFT1P37268 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
FDFT1P37268 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FDFT1P37268 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
FDFT1P37268 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
FDFT1P37268 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.03■□□□□ 0.8
FDFT1P37268 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FDFT1P37268 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.03■□□□□ 0.8
FDFT1P37268 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
FDFT1P37268 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.03■□□□□ 0.8
FDFT1P37268 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.03■□□□□ 0.8
FDFT1P37268 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
FDFT1P37268 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
FDFT1P37268 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
FDFT1P37268 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
FDFT1P37268 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.02■□□□□ 0.8
FDFT1P37268 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
FDFT1P37268 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.02■□□□□ 0.8
FDFT1P37268 NCF1B-203ENST00000435988 1254 ntBASIC20.02■□□□□ 0.8
FDFT1P37268 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
FDFT1P37268 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.02■□□□□ 0.8
FDFT1P37268 TFP1-202ENST00000475455 1573 ntBASIC20.02■□□□□ 0.8
FDFT1P37268 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
FDFT1P37268 Z82202.1-201ENST00000623446 1880 ntBASIC20.02■□□□□ 0.8
FDFT1P37268 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
FDFT1P37268 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
FDFT1P37268 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
FDFT1P37268 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.02■□□□□ 0.79
FDFT1P37268 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
FDFT1P37268 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.02■□□□□ 0.79
FDFT1P37268 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.01■□□□□ 0.79
FDFT1P37268 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
FDFT1P37268 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.01■□□□□ 0.79
FDFT1P37268 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
FDFT1P37268 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.01■□□□□ 0.79
FDFT1P37268 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms