Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 NAPSB-206ENST00000562112 1266 ntBASIC20.73■□□□□ 0.91
HOXD11P31277 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC20.73■□□□□ 0.91
HOXD11P31277 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
HOXD11P31277 IGFL2-AS1-203ENST00000598518 1037 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HOXD11P31277 DBP-204ENST00000599385 709 ntTSL 3 BASIC20.73■□□□□ 0.91
HOXD11P31277 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC20.73■□□□□ 0.91
HOXD11P31277 NDUFV2-AS1-203ENST00000608008 779 ntBASIC20.73■□□□□ 0.91
HOXD11P31277 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HOXD11P31277 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HOXD11P31277 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.73■□□□□ 0.91
HOXD11P31277 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
HOXD11P31277 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
HOXD11P31277 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.73■□□□□ 0.91
HOXD11P31277 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
HOXD11P31277 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.72■□□□□ 0.91
HOXD11P31277 AC023050.4-201ENST00000538830 1380 ntBASIC20.72■□□□□ 0.91
HOXD11P31277 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.72■□□□□ 0.91
HOXD11P31277 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HOXD11P31277 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.72■□□□□ 0.91
HOXD11P31277 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HOXD11P31277 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HOXD11P31277 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HOXD11P31277 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HOXD11P31277 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
HOXD11P31277 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
HOXD11P31277 Y_RNA.110-201ENST00000363220 99 ntBASIC20.72■□□□□ 0.91
HOXD11P31277 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
HOXD11P31277 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.72■□□□□ 0.91
HOXD11P31277 KRASP1-201ENST00000407852 552 ntBASIC20.72■□□□□ 0.91
HOXD11P31277 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC20.72■□□□□ 0.91
HOXD11P31277 AK3P5-201ENST00000432033 519 ntBASIC20.72■□□□□ 0.91
HOXD11P31277 AL590004.3-201ENST00000450255 443 ntTSL 5 BASIC20.72■□□□□ 0.91
HOXD11P31277 RBM17P1-201ENST00000453646 1190 ntBASIC20.72■□□□□ 0.91
HOXD11P31277 AL139824.2-201ENST00000458731 1095 ntBASIC20.72■□□□□ 0.91
HOXD11P31277 AC005351.1-201ENST00000511152 786 ntBASIC20.72■□□□□ 0.91
HOXD11P31277 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.72■□□□□ 0.91
HOXD11P31277 AL357093.1-201ENST00000556926 458 ntTSL 2 BASIC20.72■□□□□ 0.91
HOXD11P31277 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
HOXD11P31277 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC20.72■□□□□ 0.91
HOXD11P31277 AC005730.2-201ENST00000564549 1184 ntBASIC20.72■□□□□ 0.91
HOXD11P31277 AC074051.4-201ENST00000564888 892 ntBASIC20.72■□□□□ 0.91
HOXD11P31277 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.72■□□□□ 0.91
HOXD11P31277 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.72■□□□□ 0.91
HOXD11P31277 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC20.72■□□□□ 0.91
HOXD11P31277 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
HOXD11P31277 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
HOXD11P31277 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
HOXD11P31277 AC027702.1-201ENST00000563810 1770 ntBASIC20.72■□□□□ 0.91
HOXD11P31277 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HOXD11P31277 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC20.72■□□□□ 0.91
HOXD11P31277 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HOXD11P31277 AC079598.2-202ENST00000546624 1451 ntBASIC20.71■□□□□ 0.91
HOXD11P31277 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.71■□□□□ 0.91
HOXD11P31277 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
HOXD11P31277 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.71■□□□□ 0.91
HOXD11P31277 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.71■□□□□ 0.91
HOXD11P31277 MTND1P34-201ENST00000438556 671 ntBASIC20.71■□□□□ 0.91
HOXD11P31277 AP006222.1-201ENST00000442116 1292 ntTSL 5 BASIC20.71■□□□□ 0.91
HOXD11P31277 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC20.71■□□□□ 0.91
HOXD11P31277 PDE4D-209ENST00000502575 1040 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HOXD11P31277 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC20.71■□□□□ 0.91
HOXD11P31277 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC20.71■□□□□ 0.91
HOXD11P31277 SAA2-203ENST00000526900 687 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
HOXD11P31277 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC20.71■□□□□ 0.91
HOXD11P31277 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC20.71■□□□□ 0.91
HOXD11P31277 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC20.71■□□□□ 0.91
HOXD11P31277 MYC-208ENST00000641036 567 ntBASIC20.71■□□□□ 0.91
HOXD11P31277 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
HOXD11P31277 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HOXD11P31277 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HOXD11P31277 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
HOXD11P31277 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.7■□□□□ 0.9
HOXD11P31277 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
HOXD11P31277 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HOXD11P31277 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HOXD11P31277 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.7■□□□□ 0.9
HOXD11P31277 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HOXD11P31277 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
HOXD11P31277 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC20.7■□□□□ 0.9
HOXD11P31277 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC20.7■□□□□ 0.9
HOXD11P31277 AC121161.1-201ENST00000510606 652 ntBASIC20.7■□□□□ 0.9
HOXD11P31277 AP003033.1-201ENST00000527244 415 ntBASIC20.7■□□□□ 0.9
HOXD11P31277 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
HOXD11P31277 SUZ12P1-207ENST00000583950 741 ntTSL 5 BASIC20.7■□□□□ 0.9
HOXD11P31277 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC20.7■□□□□ 0.9
HOXD11P31277 LINC02084-201ENST00000606069 1096 ntBASIC20.7■□□□□ 0.9
HOXD11P31277 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.7■□□□□ 0.9
HOXD11P31277 AL031667.3-201ENST00000620124 655 ntBASIC20.7■□□□□ 0.9
HOXD11P31277 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.7■□□□□ 0.9
HOXD11P31277 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.7■□□□□ 0.9
HOXD11P31277 AC144652.1-201ENST00000609974 1624 ntBASIC20.7■□□□□ 0.9
HOXD11P31277 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
HOXD11P31277 AL132996.1-201ENST00000569865 1431 ntTSL 5 BASIC20.7■□□□□ 0.9
HOXD11P31277 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
HOXD11P31277 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.69■□□□□ 0.9
HOXD11P31277 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.69■□□□□ 0.9
HOXD11P31277 AL031133.1-201ENST00000406807 723 ntBASIC20.69■□□□□ 0.9
HOXD11P31277 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.69■□□□□ 0.9
HOXD11P31277 AL358176.4-201ENST00000428891 675 ntTSL 2 BASIC20.69■□□□□ 0.9
HOXD11P31277 AC013402.3-201ENST00000438566 451 ntTSL 2 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms