Protein–RNA interactions for Protein: P25106

ACKR3, Atypical chemokine receptor 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACKR3P25106 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
ACKR3P25106 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
ACKR3P25106 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.07■□□□□ 0.32
ACKR3P25106 NCF1B-203ENST00000435988 1254 ntBASIC17.07■□□□□ 0.32
ACKR3P25106 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
ACKR3P25106 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC17.07■□□□□ 0.32
ACKR3P25106 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.07■□□□□ 0.32
ACKR3P25106 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ACKR3P25106 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ACKR3P25106 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ACKR3P25106 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ACKR3P25106 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ACKR3P25106 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ACKR3P25106 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.07■□□□□ 0.32
ACKR3P25106 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ACKR3P25106 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ACKR3P25106 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
ACKR3P25106 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ACKR3P25106 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ACKR3P25106 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ACKR3P25106 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.06■□□□□ 0.32
ACKR3P25106 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
ACKR3P25106 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
ACKR3P25106 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ACKR3P25106 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ACKR3P25106 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
ACKR3P25106 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ACKR3P25106 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ACKR3P25106 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.06■□□□□ 0.32
ACKR3P25106 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.06■□□□□ 0.32
ACKR3P25106 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ACKR3P25106 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.06■□□□□ 0.32
ACKR3P25106 DUSP5P2-201ENST00000426873 1033 ntBASIC17.06■□□□□ 0.32
ACKR3P25106 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.06■□□□□ 0.32
ACKR3P25106 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.06■□□□□ 0.32
ACKR3P25106 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
ACKR3P25106 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.06■□□□□ 0.32
ACKR3P25106 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
ACKR3P25106 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.06■□□□□ 0.32
ACKR3P25106 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ACKR3P25106 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
ACKR3P25106 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ACKR3P25106 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ACKR3P25106 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ACKR3P25106 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ACKR3P25106 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.06■□□□□ 0.32
ACKR3P25106 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.05■□□□□ 0.32
ACKR3P25106 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
ACKR3P25106 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ACKR3P25106 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ACKR3P25106 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ACKR3P25106 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.05■□□□□ 0.32
ACKR3P25106 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ACKR3P25106 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ACKR3P25106 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ACKR3P25106 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ACKR3P25106 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
ACKR3P25106 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ACKR3P25106 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.05■□□□□ 0.32
ACKR3P25106 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.05■□□□□ 0.32
ACKR3P25106 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ACKR3P25106 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
ACKR3P25106 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ACKR3P25106 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ACKR3P25106 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ACKR3P25106 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.05■□□□□ 0.32
ACKR3P25106 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.05■□□□□ 0.32
ACKR3P25106 TSPY6P-201ENST00000448518 926 ntBASIC17.05■□□□□ 0.32
ACKR3P25106 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.05■□□□□ 0.32
ACKR3P25106 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.05■□□□□ 0.32
ACKR3P25106 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.05■□□□□ 0.32
ACKR3P25106 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.05■□□□□ 0.32
ACKR3P25106 AC092118.2-201ENST00000613495 667 ntBASIC17.05■□□□□ 0.32
ACKR3P25106 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.05■□□□□ 0.32
ACKR3P25106 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ACKR3P25106 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.05■□□□□ 0.32
ACKR3P25106 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ACKR3P25106 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ACKR3P25106 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ACKR3P25106 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ACKR3P25106 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.05■□□□□ 0.32
ACKR3P25106 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ACKR3P25106 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
ACKR3P25106 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ACKR3P25106 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ACKR3P25106 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ACKR3P25106 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.04■□□□□ 0.32
ACKR3P25106 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.04■□□□□ 0.32
ACKR3P25106 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ACKR3P25106 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
ACKR3P25106 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ACKR3P25106 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
ACKR3P25106 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ACKR3P25106 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.04■□□□□ 0.32
ACKR3P25106 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.04■□□□□ 0.32
ACKR3P25106 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.04■□□□□ 0.32
ACKR3P25106 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ACKR3P25106 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
ACKR3P25106 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.04■□□□□ 0.32
ACKR3P25106 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms