Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.36■□□□□ 0.53
CHMP24386 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.36■□□□□ 0.53
CHMP24386 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.36■□□□□ 0.53
CHMP24386 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.36■□□□□ 0.53
CHMP24386 C2orf69P4-201ENST00000565394 541 ntBASIC18.36■□□□□ 0.53
CHMP24386 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP24386 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP24386 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP24386 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP24386 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CHMP24386 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP24386 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CHMP24386 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CHMP24386 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.35■□□□□ 0.53
CHMP24386 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP24386 TNXA-203ENST00000507684 2038 ntBASIC18.35■□□□□ 0.53
CHMP24386 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP24386 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP24386 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP24386 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CHMP24386 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP24386 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.35■□□□□ 0.53
CHMP24386 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CHMP24386 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP24386 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP24386 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP24386 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP24386 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP24386 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP24386 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.35■□□□□ 0.53
CHMP24386 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.35■□□□□ 0.53
CHMP24386 RNA5SP413-201ENST00000516373 109 ntBASIC18.35■□□□□ 0.53
CHMP24386 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.35■□□□□ 0.53
CHMP24386 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.35■□□□□ 0.53
CHMP24386 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.35■□□□□ 0.53
CHMP24386 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP24386 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.35■□□□□ 0.53
CHMP24386 HLA-B-256ENST00000639848 1089 ntBASIC18.35■□□□□ 0.53
CHMP24386 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CHMP24386 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP24386 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.35■□□□□ 0.53
CHMP24386 AC093484.2-201ENST00000580996 2166 ntBASIC18.35■□□□□ 0.53
CHMP24386 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.35■□□□□ 0.53
CHMP24386 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.35■□□□□ 0.53
CHMP24386 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CHMP24386 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CHMP24386 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP24386 TREX1-205ENST00000625293 1783 ntBASIC18.35■□□□□ 0.53
CHMP24386 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP24386 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP24386 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.34■□□□□ 0.53
CHMP24386 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP24386 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP24386 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.34■□□□□ 0.53
CHMP24386 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.34■□□□□ 0.53
CHMP24386 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP24386 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP24386 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP24386 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP24386 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.34■□□□□ 0.53
CHMP24386 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP24386 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP24386 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.34■□□□□ 0.53
CHMP24386 FAM201B-201ENST00000458407 597 ntBASIC18.34■□□□□ 0.53
CHMP24386 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP24386 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.34■□□□□ 0.53
CHMP24386 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.34■□□□□ 0.53
CHMP24386 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP24386 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP24386 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.34■□□□□ 0.53
CHMP24386 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CHMP24386 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP24386 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CHMP24386 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHMP24386 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.34■□□□□ 0.53
CHMP24386 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHMP24386 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.33■□□□□ 0.53
CHMP24386 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHMP24386 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHMP24386 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
CHMP24386 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
CHMP24386 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHMP24386 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHMP24386 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHMP24386 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHMP24386 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CHMP24386 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CHMP24386 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHMP24386 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.33■□□□□ 0.53
CHMP24386 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHMP24386 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CHMP24386 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHMP24386 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.33■□□□□ 0.52
CHMP24386 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CHMP24386 AC060766.5-201ENST00000590539 871 ntBASIC18.33■□□□□ 0.52
CHMP24386 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHMP24386 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.33■□□□□ 0.52
CHMP24386 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.33■□□□□ 0.52
CHMP24386 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
CHMP24386 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms