Protein–RNA interactions for Protein: P18085

ARF4, ADP-ribosylation factor 4, humanhuman

Predicted RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARF4P18085 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.4■■□□□ 1.02
ARF4P18085 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
ARF4P18085 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ARF4P18085 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
ARF4P18085 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.4■■□□□ 1.02
ARF4P18085 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC21.4■■□□□ 1.02
ARF4P18085 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
ARF4P18085 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
ARF4P18085 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ARF4P18085 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
ARF4P18085 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC21.4■■□□□ 1.02
ARF4P18085 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC21.4■■□□□ 1.02
ARF4P18085 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC21.4■■□□□ 1.02
ARF4P18085 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC21.4■■□□□ 1.02
ARF4P18085 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC21.4■■□□□ 1.02
ARF4P18085 REXO1L10P-201ENST00000615707 1290 ntBASIC21.4■■□□□ 1.02
ARF4P18085 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
ARF4P18085 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
ARF4P18085 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
ARF4P18085 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ARF4P18085 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
ARF4P18085 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ARF4P18085 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.4■■□□□ 1.02
ARF4P18085 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.4■■□□□ 1.02
ARF4P18085 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
ARF4P18085 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ARF4P18085 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.4■■□□□ 1.02
ARF4P18085 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
ARF4P18085 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.39■■□□□ 1.02
ARF4P18085 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.39■■□□□ 1.02
ARF4P18085 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
ARF4P18085 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
ARF4P18085 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.39■■□□□ 1.02
ARF4P18085 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.39■■□□□ 1.02
ARF4P18085 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
ARF4P18085 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC21.39■■□□□ 1.01
ARF4P18085 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
ARF4P18085 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC21.39■■□□□ 1.01
ARF4P18085 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC21.39■■□□□ 1.01
ARF4P18085 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
ARF4P18085 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC21.39■■□□□ 1.01
ARF4P18085 RPS20-210ENST00000523936 899 ntTSL 2 BASIC21.39■■□□□ 1.01
ARF4P18085 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
ARF4P18085 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
ARF4P18085 AL445675.2-201ENST00000620291 557 ntBASIC21.39■■□□□ 1.01
ARF4P18085 DECR2-212ENST00000627716 352 ntTSL 2 BASIC21.39■■□□□ 1.01
ARF4P18085 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
ARF4P18085 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.39■■□□□ 1.01
ARF4P18085 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.39■■□□□ 1.01
ARF4P18085 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
ARF4P18085 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.39■■□□□ 1.01
ARF4P18085 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
ARF4P18085 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
ARF4P18085 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ARF4P18085 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
ARF4P18085 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
ARF4P18085 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
ARF4P18085 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC21.38■■□□□ 1.01
ARF4P18085 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC21.38■■□□□ 1.01
ARF4P18085 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC21.38■■□□□ 1.01
ARF4P18085 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
ARF4P18085 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ARF4P18085 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
ARF4P18085 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
ARF4P18085 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
ARF4P18085 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ARF4P18085 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
ARF4P18085 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ARF4P18085 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ARF4P18085 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ARF4P18085 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
ARF4P18085 AC009237.14-201ENST00000609975 1594 ntBASIC21.37■■□□□ 1.01
ARF4P18085 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ARF4P18085 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ARF4P18085 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC21.37■■□□□ 1.01
ARF4P18085 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ARF4P18085 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC21.37■■□□□ 1.01
ARF4P18085 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC21.37■■□□□ 1.01
ARF4P18085 ABBA01031674.1-201ENST00000635145 728 ntBASIC21.37■■□□□ 1.01
ARF4P18085 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.37■■□□□ 1.01
ARF4P18085 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC21.37■■□□□ 1.01
ARF4P18085 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
ARF4P18085 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
ARF4P18085 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
ARF4P18085 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
ARF4P18085 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC21.36■■□□□ 1.01
ARF4P18085 AC211429.1-201ENST00000415277 523 ntBASIC21.36■■□□□ 1.01
ARF4P18085 PPP1R14BP5-201ENST00000440334 435 ntBASIC21.36■■□□□ 1.01
ARF4P18085 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC21.36■■□□□ 1.01
ARF4P18085 AC116562.2-201ENST00000507042 360 ntBASIC21.36■■□□□ 1.01
ARF4P18085 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC21.36■■□□□ 1.01
ARF4P18085 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC21.36■■□□□ 1.01
ARF4P18085 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
ARF4P18085 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.36■■□□□ 1.01
ARF4P18085 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
ARF4P18085 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
ARF4P18085 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ARF4P18085 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.36■■□□□ 1.01
ARF4P18085 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
ARF4P18085 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms