Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HIST1H1DP16402 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC16.69■□□□□ 0.26
HIST1H1DP16402 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
HIST1H1DP16402 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HIST1H1DP16402 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HIST1H1DP16402 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
HIST1H1DP16402 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HIST1H1DP16402 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
HIST1H1DP16402 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H1DP16402 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H1DP16402 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H1DP16402 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H1DP16402 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H1DP16402 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H1DP16402 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H1DP16402 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H1DP16402 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H1DP16402 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.68■□□□□ 0.26
HIST1H1DP16402 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H1DP16402 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H1DP16402 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC16.68■□□□□ 0.26
HIST1H1DP16402 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H1DP16402 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
HIST1H1DP16402 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H1DP16402 BMP1-204ENST00000397814 836 ntTSL 4 BASIC16.68■□□□□ 0.26
HIST1H1DP16402 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H1DP16402 AC013268.1-206ENST00000638368 961 ntBASIC16.68■□□□□ 0.26
HIST1H1DP16402 AC112229.1-201ENST00000639295 961 ntBASIC16.68■□□□□ 0.26
HIST1H1DP16402 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H1DP16402 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H1DP16402 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H1DP16402 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H1DP16402 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H1DP16402 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H1DP16402 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
HIST1H1DP16402 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H1DP16402 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
HIST1H1DP16402 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HIST1H1DP16402 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HIST1H1DP16402 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HIST1H1DP16402 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HIST1H1DP16402 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
HIST1H1DP16402 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HIST1H1DP16402 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HIST1H1DP16402 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
HIST1H1DP16402 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HIST1H1DP16402 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HIST1H1DP16402 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HIST1H1DP16402 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HIST1H1DP16402 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HIST1H1DP16402 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC16.67■□□□□ 0.26
HIST1H1DP16402 MFSD11-216ENST00000590393 1141 ntBASIC16.67■□□□□ 0.26
HIST1H1DP16402 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC16.67■□□□□ 0.26
HIST1H1DP16402 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
HIST1H1DP16402 AC105020.6-201ENST00000621523 1217 ntBASIC16.67■□□□□ 0.26
HIST1H1DP16402 AL138781.2-201ENST00000617896 1843 ntBASIC16.67■□□□□ 0.26
HIST1H1DP16402 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.67■□□□□ 0.26
HIST1H1DP16402 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
HIST1H1DP16402 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
HIST1H1DP16402 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
HIST1H1DP16402 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
HIST1H1DP16402 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HIST1H1DP16402 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HIST1H1DP16402 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HIST1H1DP16402 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.66■□□□□ 0.26
HIST1H1DP16402 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HIST1H1DP16402 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.66■□□□□ 0.26
HIST1H1DP16402 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HIST1H1DP16402 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HIST1H1DP16402 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
HIST1H1DP16402 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HIST1H1DP16402 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.66■□□□□ 0.26
HIST1H1DP16402 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HIST1H1DP16402 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.66■□□□□ 0.26
HIST1H1DP16402 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.66■□□□□ 0.26
HIST1H1DP16402 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HIST1H1DP16402 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
HIST1H1DP16402 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HIST1H1DP16402 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HIST1H1DP16402 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HIST1H1DP16402 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HIST1H1DP16402 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HIST1H1DP16402 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HIST1H1DP16402 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.65■□□□□ 0.26
HIST1H1DP16402 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HIST1H1DP16402 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HIST1H1DP16402 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.65■□□□□ 0.26
HIST1H1DP16402 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.65■□□□□ 0.26
HIST1H1DP16402 NEFHP1-201ENST00000412845 2629 ntBASIC16.65■□□□□ 0.26
HIST1H1DP16402 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HIST1H1DP16402 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC16.65■□□□□ 0.26
HIST1H1DP16402 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC16.65■□□□□ 0.26
HIST1H1DP16402 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
HIST1H1DP16402 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HIST1H1DP16402 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HIST1H1DP16402 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HIST1H1DP16402 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HIST1H1DP16402 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HIST1H1DP16402 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HIST1H1DP16402 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms