Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
CAPN1P07384 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.33■□□□□ 0.69
CAPN1P07384 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CAPN1P07384 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
CAPN1P07384 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.33■□□□□ 0.68
CAPN1P07384 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.33■□□□□ 0.68
CAPN1P07384 AC116562.4-201ENST00000641316 2276 ntBASIC19.33■□□□□ 0.68
CAPN1P07384 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CAPN1P07384 KRT8P17-201ENST00000453110 1448 ntBASIC19.33■□□□□ 0.68
CAPN1P07384 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.33■□□□□ 0.68
CAPN1P07384 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CAPN1P07384 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.32■□□□□ 0.68
CAPN1P07384 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CAPN1P07384 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.32■□□□□ 0.68
CAPN1P07384 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.32■□□□□ 0.68
CAPN1P07384 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CAPN1P07384 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CAPN1P07384 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.32■□□□□ 0.68
CAPN1P07384 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CAPN1P07384 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CAPN1P07384 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.32■□□□□ 0.68
CAPN1P07384 AC093827.2-201ENST00000512654 315 ntBASIC19.32■□□□□ 0.68
CAPN1P07384 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.32■□□□□ 0.68
CAPN1P07384 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CAPN1P07384 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.32■□□□□ 0.68
CAPN1P07384 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CAPN1P07384 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.32■□□□□ 0.68
CAPN1P07384 AC073648.6-201ENST00000641589 218 ntBASIC19.32■□□□□ 0.68
CAPN1P07384 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
CAPN1P07384 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CAPN1P07384 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CAPN1P07384 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.32■□□□□ 0.68
CAPN1P07384 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CAPN1P07384 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CAPN1P07384 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CAPN1P07384 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CAPN1P07384 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CAPN1P07384 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.31■□□□□ 0.68
CAPN1P07384 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.31■□□□□ 0.68
CAPN1P07384 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CAPN1P07384 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CAPN1P07384 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CAPN1P07384 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CAPN1P07384 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.31■□□□□ 0.68
CAPN1P07384 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CAPN1P07384 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.31■□□□□ 0.68
CAPN1P07384 PNMA6B-201ENST00000538162 1200 ntBASIC19.31■□□□□ 0.68
CAPN1P07384 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.31■□□□□ 0.68
CAPN1P07384 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.31■□□□□ 0.68
CAPN1P07384 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.31■□□□□ 0.68
CAPN1P07384 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.31■□□□□ 0.68
CAPN1P07384 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CAPN1P07384 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CAPN1P07384 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CAPN1P07384 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CAPN1P07384 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CAPN1P07384 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.31■□□□□ 0.68
CAPN1P07384 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CAPN1P07384 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CAPN1P07384 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CAPN1P07384 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.3■□□□□ 0.68
CAPN1P07384 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
CAPN1P07384 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CAPN1P07384 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.3■□□□□ 0.68
CAPN1P07384 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CAPN1P07384 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CAPN1P07384 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CAPN1P07384 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CAPN1P07384 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CAPN1P07384 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CAPN1P07384 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CAPN1P07384 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CAPN1P07384 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CAPN1P07384 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.3■□□□□ 0.68
CAPN1P07384 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.3■□□□□ 0.68
CAPN1P07384 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CAPN1P07384 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.3■□□□□ 0.68
CAPN1P07384 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CAPN1P07384 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CAPN1P07384 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CAPN1P07384 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CAPN1P07384 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CAPN1P07384 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.29■□□□□ 0.68
CAPN1P07384 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CAPN1P07384 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CAPN1P07384 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CAPN1P07384 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.29■□□□□ 0.68
CAPN1P07384 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CAPN1P07384 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.29■□□□□ 0.68
CAPN1P07384 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.29■□□□□ 0.68
CAPN1P07384 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
CAPN1P07384 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.29■□□□□ 0.68
CAPN1P07384 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CAPN1P07384 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.29■□□□□ 0.68
CAPN1P07384 AL031963.3-201ENST00000606441 850 ntBASIC19.29■□□□□ 0.68
CAPN1P07384 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CAPN1P07384 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CAPN1P07384 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CAPN1P07384 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CAPN1P07384 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms