Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.98■□□□□ 0.79
HLA-DQB2P05538 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.98■□□□□ 0.79
HLA-DQB2P05538 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.98■□□□□ 0.79
HLA-DQB2P05538 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.98■□□□□ 0.79
HLA-DQB2P05538 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.98■□□□□ 0.79
HLA-DQB2P05538 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HLA-DQB2P05538 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.98■□□□□ 0.79
HLA-DQB2P05538 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
HLA-DQB2P05538 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
HLA-DQB2P05538 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HLA-DQB2P05538 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
HLA-DQB2P05538 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HLA-DQB2P05538 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HLA-DQB2P05538 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HLA-DQB2P05538 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HLA-DQB2P05538 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HLA-DQB2P05538 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HLA-DQB2P05538 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HLA-DQB2P05538 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HLA-DQB2P05538 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HLA-DQB2P05538 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HLA-DQB2P05538 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HLA-DQB2P05538 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HLA-DQB2P05538 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.97■□□□□ 0.79
HLA-DQB2P05538 KRT17P3-201ENST00000420566 1262 ntBASIC19.97■□□□□ 0.79
HLA-DQB2P05538 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HLA-DQB2P05538 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HLA-DQB2P05538 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
HLA-DQB2P05538 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HLA-DQB2P05538 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HLA-DQB2P05538 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
HLA-DQB2P05538 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.97■□□□□ 0.79
HLA-DQB2P05538 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HLA-DQB2P05538 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HLA-DQB2P05538 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HLA-DQB2P05538 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
HLA-DQB2P05538 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.96■□□□□ 0.79
HLA-DQB2P05538 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HLA-DQB2P05538 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HLA-DQB2P05538 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.96■□□□□ 0.79
HLA-DQB2P05538 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.96■□□□□ 0.79
HLA-DQB2P05538 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.96■□□□□ 0.79
HLA-DQB2P05538 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.96■□□□□ 0.79
HLA-DQB2P05538 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HLA-DQB2P05538 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HLA-DQB2P05538 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
HLA-DQB2P05538 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HLA-DQB2P05538 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HLA-DQB2P05538 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HLA-DQB2P05538 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.96■□□□□ 0.79
HLA-DQB2P05538 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HLA-DQB2P05538 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
HLA-DQB2P05538 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.96■□□□□ 0.79
HLA-DQB2P05538 AP006587.1-201ENST00000534129 1502 ntBASIC19.96■□□□□ 0.79
HLA-DQB2P05538 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
HLA-DQB2P05538 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HLA-DQB2P05538 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HLA-DQB2P05538 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
HLA-DQB2P05538 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HLA-DQB2P05538 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HLA-DQB2P05538 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HLA-DQB2P05538 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.95■□□□□ 0.78
HLA-DQB2P05538 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HLA-DQB2P05538 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.95■□□□□ 0.78
HLA-DQB2P05538 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
HLA-DQB2P05538 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.95■□□□□ 0.78
HLA-DQB2P05538 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.95■□□□□ 0.78
HLA-DQB2P05538 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
HLA-DQB2P05538 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.95■□□□□ 0.78
HLA-DQB2P05538 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
HLA-DQB2P05538 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.95■□□□□ 0.78
HLA-DQB2P05538 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HLA-DQB2P05538 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HLA-DQB2P05538 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.95■□□□□ 0.78
HLA-DQB2P05538 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
HLA-DQB2P05538 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HLA-DQB2P05538 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-DQB2P05538 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.94■□□□□ 0.78
HLA-DQB2P05538 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-DQB2P05538 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-DQB2P05538 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-DQB2P05538 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.94■□□□□ 0.78
HLA-DQB2P05538 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-DQB2P05538 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-DQB2P05538 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.94■□□□□ 0.78
HLA-DQB2P05538 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
HLA-DQB2P05538 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-DQB2P05538 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
HLA-DQB2P05538 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-DQB2P05538 POU5F1P3-201ENST00000428824 1078 ntBASIC19.94■□□□□ 0.78
HLA-DQB2P05538 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.94■□□□□ 0.78
HLA-DQB2P05538 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-DQB2P05538 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
HLA-DQB2P05538 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.94■□□□□ 0.78
HLA-DQB2P05538 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.94■□□□□ 0.78
HLA-DQB2P05538 MTDHP1-201ENST00000605323 784 ntBASIC19.94■□□□□ 0.78
HLA-DQB2P05538 AC006058.3-201ENST00000606217 1069 ntBASIC19.94■□□□□ 0.78
HLA-DQB2P05538 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.94■□□□□ 0.78
HLA-DQB2P05538 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-DQB2P05538 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms