Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.64■□□□□ 0.89
TRUB2O95900 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRUB2O95900 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.64■□□□□ 0.89
TRUB2O95900 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.64■□□□□ 0.89
TRUB2O95900 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRUB2O95900 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRUB2O95900 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRUB2O95900 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRUB2O95900 TREX1-205ENST00000625293 1783 ntBASIC20.64■□□□□ 0.89
TRUB2O95900 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.64■□□□□ 0.89
TRUB2O95900 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRUB2O95900 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRUB2O95900 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.64■□□□□ 0.89
TRUB2O95900 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRUB2O95900 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRUB2O95900 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRUB2O95900 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRUB2O95900 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.63■□□□□ 0.89
TRUB2O95900 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRUB2O95900 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRUB2O95900 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRUB2O95900 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.63■□□□□ 0.89
TRUB2O95900 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.63■□□□□ 0.89
TRUB2O95900 RN7SL471P-201ENST00000580476 299 ntBASIC20.63■□□□□ 0.89
TRUB2O95900 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
TRUB2O95900 TMEM191A-211ENST00000637163 1067 ntBASIC20.63■□□□□ 0.89
TRUB2O95900 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRUB2O95900 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.63■□□□□ 0.89
TRUB2O95900 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRUB2O95900 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.63■□□□□ 0.89
TRUB2O95900 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
TRUB2O95900 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.63■□□□□ 0.89
TRUB2O95900 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRUB2O95900 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRUB2O95900 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRUB2O95900 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRUB2O95900 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.62■□□□□ 0.89
TRUB2O95900 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRUB2O95900 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRUB2O95900 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRUB2O95900 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRUB2O95900 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.62■□□□□ 0.89
TRUB2O95900 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.62■□□□□ 0.89
TRUB2O95900 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRUB2O95900 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRUB2O95900 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRUB2O95900 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.62■□□□□ 0.89
TRUB2O95900 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.62■□□□□ 0.89
TRUB2O95900 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.62■□□□□ 0.89
TRUB2O95900 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRUB2O95900 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRUB2O95900 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
TRUB2O95900 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRUB2O95900 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRUB2O95900 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRUB2O95900 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRUB2O95900 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.61■□□□□ 0.89
TRUB2O95900 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRUB2O95900 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.61■□□□□ 0.89
TRUB2O95900 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.61■□□□□ 0.89
TRUB2O95900 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
TRUB2O95900 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.61■□□□□ 0.89
TRUB2O95900 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRUB2O95900 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRUB2O95900 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRUB2O95900 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRUB2O95900 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.61■□□□□ 0.89
TRUB2O95900 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.61■□□□□ 0.89
TRUB2O95900 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.61■□□□□ 0.89
TRUB2O95900 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.61■□□□□ 0.89
TRUB2O95900 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.61■□□□□ 0.89
TRUB2O95900 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.61■□□□□ 0.89
TRUB2O95900 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
TRUB2O95900 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
TRUB2O95900 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.61■□□□□ 0.89
TRUB2O95900 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRUB2O95900 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRUB2O95900 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
TRUB2O95900 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.6■□□□□ 0.89
TRUB2O95900 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRUB2O95900 TFP1-202ENST00000475455 1573 ntBASIC20.6■□□□□ 0.89
TRUB2O95900 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.6■□□□□ 0.89
TRUB2O95900 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.6■□□□□ 0.89
TRUB2O95900 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRUB2O95900 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRUB2O95900 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.6■□□□□ 0.89
TRUB2O95900 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRUB2O95900 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRUB2O95900 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.6■□□□□ 0.89
TRUB2O95900 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRUB2O95900 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.6■□□□□ 0.89
TRUB2O95900 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRUB2O95900 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRUB2O95900 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRUB2O95900 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRUB2O95900 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRUB2O95900 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.59■□□□□ 0.89
TRUB2O95900 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRUB2O95900 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRUB2O95900 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms