Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC21.12■□□□□ 0.97
CSPG5O95196 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC21.12■□□□□ 0.97
CSPG5O95196 AP006587.1-201ENST00000534129 1502 ntBASIC21.12■□□□□ 0.97
CSPG5O95196 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CSPG5O95196 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CSPG5O95196 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CSPG5O95196 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.12■□□□□ 0.97
CSPG5O95196 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CSPG5O95196 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.12■□□□□ 0.97
CSPG5O95196 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CSPG5O95196 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CSPG5O95196 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.11■□□□□ 0.97
CSPG5O95196 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CSPG5O95196 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CSPG5O95196 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC21.11■□□□□ 0.97
CSPG5O95196 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CSPG5O95196 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CSPG5O95196 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CSPG5O95196 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
CSPG5O95196 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CSPG5O95196 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
CSPG5O95196 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CSPG5O95196 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CSPG5O95196 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CSPG5O95196 MESTP1-201ENST00000404287 994 ntBASIC21.11■□□□□ 0.97
CSPG5O95196 UPK3BP1-201ENST00000428678 509 ntBASIC21.11■□□□□ 0.97
CSPG5O95196 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CSPG5O95196 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC21.11■□□□□ 0.97
CSPG5O95196 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC21.11■□□□□ 0.97
CSPG5O95196 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CSPG5O95196 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CSPG5O95196 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.11■□□□□ 0.97
CSPG5O95196 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CSPG5O95196 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CSPG5O95196 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CSPG5O95196 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.1■□□□□ 0.97
CSPG5O95196 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.1■□□□□ 0.97
CSPG5O95196 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.1■□□□□ 0.97
CSPG5O95196 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.1■□□□□ 0.97
CSPG5O95196 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
CSPG5O95196 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CSPG5O95196 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC21.1■□□□□ 0.97
CSPG5O95196 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC21.1■□□□□ 0.97
CSPG5O95196 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CSPG5O95196 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC21.1■□□□□ 0.97
CSPG5O95196 WDR88-203ENST00000592765 651 ntTSL 5 BASIC21.1■□□□□ 0.97
CSPG5O95196 GRAMD4P8-201ENST00000605465 1115 ntBASIC21.1■□□□□ 0.97
CSPG5O95196 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC21.1■□□□□ 0.97
CSPG5O95196 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CSPG5O95196 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CSPG5O95196 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CSPG5O95196 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.09■□□□□ 0.97
CSPG5O95196 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CSPG5O95196 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CSPG5O95196 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.09■□□□□ 0.97
CSPG5O95196 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CSPG5O95196 AK4P3-201ENST00000418260 669 ntBASIC21.09■□□□□ 0.97
CSPG5O95196 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC21.09■□□□□ 0.97
CSPG5O95196 AC011506.1-201ENST00000474329 610 ntBASIC21.09■□□□□ 0.97
CSPG5O95196 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC21.09■□□□□ 0.97
CSPG5O95196 AC097488.1-201ENST00000507834 756 ntBASIC21.09■□□□□ 0.97
CSPG5O95196 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC21.09■□□□□ 0.97
CSPG5O95196 METTL23-204ENST00000586752 904 ntTSL 2 BASIC21.09■□□□□ 0.97
CSPG5O95196 AL121894.2-201ENST00000602977 491 ntBASIC21.09■□□□□ 0.97
CSPG5O95196 AL358472.4-201ENST00000633140 710 ntBASIC21.09■□□□□ 0.97
CSPG5O95196 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CSPG5O95196 FP700111.2-201ENST00000619190 1892 ntBASIC21.09■□□□□ 0.97
CSPG5O95196 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CSPG5O95196 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC21.09■□□□□ 0.97
CSPG5O95196 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CSPG5O95196 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CSPG5O95196 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CSPG5O95196 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.09■□□□□ 0.97
CSPG5O95196 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CSPG5O95196 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CSPG5O95196 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
CSPG5O95196 FSCN1P1-201ENST00000568912 1481 ntBASIC21.08■□□□□ 0.97
CSPG5O95196 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
CSPG5O95196 AL049796.1-201ENST00000565336 1766 ntBASIC21.08■□□□□ 0.97
CSPG5O95196 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CSPG5O95196 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.08■□□□□ 0.97
CSPG5O95196 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.08■□□□□ 0.97
CSPG5O95196 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CSPG5O95196 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CSPG5O95196 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CSPG5O95196 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CSPG5O95196 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC21.08■□□□□ 0.97
CSPG5O95196 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC21.08■□□□□ 0.97
CSPG5O95196 B3GAT3P1-201ENST00000471720 806 ntBASIC21.08■□□□□ 0.97
CSPG5O95196 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC21.08■□□□□ 0.97
CSPG5O95196 SLC25A1P4-201ENST00000567977 778 ntBASIC21.08■□□□□ 0.97
CSPG5O95196 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.08■□□□□ 0.97
CSPG5O95196 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CSPG5O95196 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
CSPG5O95196 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CSPG5O95196 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CSPG5O95196 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CSPG5O95196 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CSPG5O95196 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CSPG5O95196 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms