Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.86■□□□□ 0.61
SNRNP200O75643 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.86■□□□□ 0.61
SNRNP200O75643 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNRNP200O75643 TMEM179-206ENST00000616017 1645 ntBASIC18.86■□□□□ 0.61
SNRNP200O75643 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNRNP200O75643 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNRNP200O75643 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNRNP200O75643 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.86■□□□□ 0.61
SNRNP200O75643 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SNRNP200O75643 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SNRNP200O75643 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNRNP200O75643 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SNRNP200O75643 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.86■□□□□ 0.61
SNRNP200O75643 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
SNRNP200O75643 PRKY-204ENST00000533551 1019 ntBASIC18.86■□□□□ 0.61
SNRNP200O75643 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.86■□□□□ 0.61
SNRNP200O75643 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.86■□□□□ 0.61
SNRNP200O75643 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNRNP200O75643 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.86■□□□□ 0.61
SNRNP200O75643 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.86■□□□□ 0.61
SNRNP200O75643 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNRNP200O75643 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SNRNP200O75643 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SNRNP200O75643 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNRNP200O75643 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.86■□□□□ 0.61
SNRNP200O75643 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SNRNP200O75643 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SNRNP200O75643 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SNRNP200O75643 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNRNP200O75643 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
SNRNP200O75643 RPS2P55-201ENST00000397318 883 ntBASIC18.85■□□□□ 0.61
SNRNP200O75643 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.85■□□□□ 0.61
SNRNP200O75643 NIFKP9-201ENST00000419265 221 ntBASIC18.85■□□□□ 0.61
SNRNP200O75643 AC107956.1-201ENST00000494359 873 ntBASIC18.85■□□□□ 0.61
SNRNP200O75643 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SNRNP200O75643 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.85■□□□□ 0.61
SNRNP200O75643 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNRNP200O75643 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNRNP200O75643 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.85■□□□□ 0.61
SNRNP200O75643 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.85■□□□□ 0.61
SNRNP200O75643 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNRNP200O75643 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNRNP200O75643 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNRNP200O75643 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNRNP200O75643 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNRNP200O75643 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNRNP200O75643 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNRNP200O75643 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.85■□□□□ 0.61
SNRNP200O75643 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SNRNP200O75643 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.85■□□□□ 0.61
SNRNP200O75643 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.85■□□□□ 0.61
SNRNP200O75643 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.85■□□□□ 0.61
SNRNP200O75643 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNRNP200O75643 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNRNP200O75643 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
SNRNP200O75643 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SNRNP200O75643 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNRNP200O75643 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SNRNP200O75643 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SNRNP200O75643 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.84■□□□□ 0.61
SNRNP200O75643 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SNRNP200O75643 KRT8P8-201ENST00000434750 1448 ntBASIC18.84■□□□□ 0.61
SNRNP200O75643 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNRNP200O75643 AP006587.1-201ENST00000534129 1502 ntBASIC18.84■□□□□ 0.61
SNRNP200O75643 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNRNP200O75643 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNRNP200O75643 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.84■□□□□ 0.61
SNRNP200O75643 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.84■□□□□ 0.61
SNRNP200O75643 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.84■□□□□ 0.61
SNRNP200O75643 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SNRNP200O75643 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SNRNP200O75643 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SNRNP200O75643 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.84■□□□□ 0.61
SNRNP200O75643 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNRNP200O75643 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SNRNP200O75643 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNRNP200O75643 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.84■□□□□ 0.61
SNRNP200O75643 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.84■□□□□ 0.61
SNRNP200O75643 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.84■□□□□ 0.61
SNRNP200O75643 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNRNP200O75643 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SNRNP200O75643 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNRNP200O75643 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.83■□□□□ 0.61
SNRNP200O75643 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
SNRNP200O75643 AL353807.1-201ENST00000427475 662 ntBASIC18.83■□□□□ 0.61
SNRNP200O75643 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.83■□□□□ 0.61
SNRNP200O75643 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
SNRNP200O75643 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.83■□□□□ 0.61
SNRNP200O75643 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.83■□□□□ 0.61
SNRNP200O75643 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SNRNP200O75643 KRT16P1-201ENST00000399124 1418 ntBASIC18.83■□□□□ 0.61
SNRNP200O75643 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.83■□□□□ 0.61
SNRNP200O75643 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SNRNP200O75643 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.83■□□□□ 0.6
SNRNP200O75643 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
SNRNP200O75643 AC004264.1-201ENST00000608354 794 ntBASIC18.83■□□□□ 0.6
SNRNP200O75643 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SNRNP200O75643 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.83■□□□□ 0.6
SNRNP200O75643 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.83■□□□□ 0.6
SNRNP200O75643 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms